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SCNpilot_expt_500_p_scaffold_450

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_450_1
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42..485)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EIR9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL32837.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
amino acid transporter
SCNpilot_expt_500_p_scaffold_450_2
unknown

Not on your lists

comp(732..1229)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_450_3
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1350..3824)
DNA (2475bp) protein (825aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] rbh
DNA topoisomerase 1 n=1 Tax=Rickettsia akari (strain Hartford) RepID=A8GN12_RICAH rbh
SCNpilot_expt_500_p_scaffold_450_4
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3817..4971)
DNA (1155bp) protein (385aa)
Putatie DNA processing protein DprA n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UM41_RICFE rbh
DNA processing protein {ECO:0000313|EMBL:KIE04559.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC36.;"
dprA; DNA processing protein DprA; K04096 DNA processing protein rbh
SCNpilot_expt_500_p_scaffold_450_5
Saccharibacter sp. AM169, Saccharibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5180..5797
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Methylocystis parvus RepID=UPI0002D42427
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1343158 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Saccharibacter.;" source="Saccharibacter sp. AM169.;"
30S ribosomal protein S4
SCNpilot_expt_500_p_scaffold_450_6
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6179..6319
DNA (141bp) protein (47aa)
GNAT family acetyltransferase n=2 Tax=Legionella longbeachae RepID=D1RLC5_LEGLO
GNAT family acetyltransferase
Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:CBJ12611.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_500_p_scaffold_450_7
unknown

Not on your lists

6597..6740
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_450_8
Mucor ambiguus, Mucor, Mucorales, Fungi

Not on your lists

comp(6900..8120)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Trichophyton equinum (strain ATCC MYA-4606 / CBS 127.97) RepID=F2Q645_TRIEC
DNA, scaffold: scf_mam1_v10075, strain NBRC 6742, whole genome shotgun sequence {ECO:0000313|EMBL:GAN04854.1}; TaxID=91626 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Mucoraceae; Mucor.;" source="Mucor ambiguus.;"
arp; ankyrin repeat-containing protein
SCNpilot_expt_500_p_scaffold_450_9
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8127..8837)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Ehrlichia canis (strain Jake) RepID=Q3YR00_EHRCJ
Uncharacterized protein {ECO:0000313|EMBL:KKB96395.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
hypothetical protein; K09991 hypothetical protein
SCNpilot_expt_500_p_scaffold_450_10
Candidatus Neoehrlichia lotoris, Candidatus Neoehrlichia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8909..10159)
DNA (1251bp) protein (417aa)
Outer membrane efflux protein n=2 Tax=Ehrlichia chaffeensis RepID=Q40JS4_EHRCH
Outer membrane efflux family protein {ECO:0000313|EMBL:KJV69507.1}; TaxID=1359163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Candidatus Neoehrlichia.;" source="Candidatus Neoehrlichia lotoris str. RAC413.;"
putative outer membrane protein TolC; K12340 outer membrane channel protein
SCNpilot_expt_500_p_scaffold_450_11
CG_CPR06_01, CG_CPR06, Bacteria

Not on your lists

comp(10152..10769)
DNA (618bp) protein (206aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000362D86F
Tax=CG_CPR06_01
SCNpilot_expt_500_p_scaffold_450_12
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

10990..12216
DNA (1227bp) protein (409aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2EYR2_TRIVA
ankyrin repeat protein
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAY02209.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
SCNpilot_expt_500_p_scaffold_450_13
Flavobacteria bacterium MS024-3C, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12219..13703
DNA (1485bp) protein (495aa)
Anion transporter n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BKS2_9BACT rbh
Anion transporter {ECO:0000313|EMBL:EEG43421.1}; Flags: Precursor;; TaxID=487797 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium MS024-3C.;"
sodium-dependent di-/tricarboxylate cotransporter rbh
SCNpilot_expt_500_p_scaffold_450_14
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13709..15040
DNA (1332bp) protein (444aa)
Flagellum-specific ATP synthase {ECO:0000313|EMBL:AIL65788.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AIL65788.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003608120 rbh
fliI; flagellum-specific ATP synthase rbh
SCNpilot_expt_500_p_scaffold_450_15
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15049..15612)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Holospora obtusa RepID=UPI0003AEDAAD
NUDIX domain protein {ECO:0000313|EMBL:ETZ07358.1}; TaxID=1399147 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_450_16
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15619..16998)
DNA (1380bp) protein (460aa)
DNA repair protein radA n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1S8_9PROT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
SCNpilot_expt_500_p_scaffold_450_17
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17005..18708)
DNA (1704bp) protein (568aa)
Glutathione-regulated potassium-efflux system protein KefB n=1 Tax=Rickettsia bellii (strain RML369-C) RepID=Q1RKL6_RICBR rbh
Glutathione-regulated potassium-efflux system protein KefC {ECO:0000313|EMBL:AIL66106.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
kefB; glutathione-regulated potassium-efflux system protein KefB; K03455 monovalent cation:H+ antiporter-2, CPA2 family rbh
SCNpilot_expt_500_p_scaffold_450_18
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18797..19525
DNA (729bp) protein (243aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSB3_9PROT
Short chain dehydrogenase {ECO:0000313|EMBL:KIE04465.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC36.;"
short chain dehydrogenase
SCNpilot_expt_500_p_scaffold_450_19
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19552..20466
DNA (915bp) protein (305aa)
Putative NAD dependent epimerase/dehydratase family protein n=2 Tax=root RepID=B3TCU3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL65503.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_500_p_scaffold_450_20
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20538..21335
DNA (798bp) protein (266aa)
Thiol:disulfide interchange protein dsbA n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GWR9_RICB8
Disulfide bond formation protein D {ECO:0000313|EMBL:KKB96046.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
thiol:disulfide interchange protein DsbA
SCNpilot_expt_500_p_scaffold_450_21
unknown

Not on your lists

comp(21622..22275)
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_450_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22285..23619)
DNA (1335bp) protein (445aa)
ATP-dependent protease ATPase subunit HslU n=2 Tax=Rhizobium loti RepID=HSLU_RHILO
hslU; ATP-dependent protease ATP-binding protein HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000255|HAMAP-Rule:MF_00249}; Unfoldase HslU {ECO:0000255|HAMAP-Rule:MF_00249}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_500_p_scaffold_450_23
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23606..24157)
DNA (552bp) protein (184aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hslV; ATP-dependent protease peptidase subunit HslV; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037815D9
SCNpilot_expt_500_p_scaffold_450_24
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24325..24699
DNA (375bp) protein (125aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
nuoA; NADH dehydrogenase subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKZ9_9PROT
SCNpilot_expt_500_p_scaffold_450_25
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24702..25259
DNA (558bp) protein (186aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
NADH:ubiquinone oxidoreductase 20 kD subunit-like protein (EC:1.6.5.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit B n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZVS4_9PROT rbh
SCNpilot_expt_500_p_scaffold_450_26
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25249..25851
DNA (603bp) protein (201aa)
NADH dehydrogenase subunit C (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
NADH-quinone oxidoreductase subunit C n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=NUOC_RHILO
SCNpilot_expt_500_p_scaffold_450_27
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25862..27043
DNA (1182bp) protein (394aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
nuoD; NADH:ubiquinone oxidoreductase subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH dehydrogenase subunit D n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI0003742FBE rbh
SCNpilot_expt_500_p_scaffold_450_28
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27040..27648
DNA (609bp) protein (203aa)
nuoE; NADH-quinone oxidoreductase subunit E (EC:1.6.99.5); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH-quinone oxidoreductase, subunit E n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LCD4_9PROT
NADH dehydrogenase {ECO:0000313|EMBL:EWY42116.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_expt_500_p_scaffold_450_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27651..28925
DNA (1275bp) protein (425aa)
NADH dehydrogenase I subunit F (EC:1.6.5.3); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
NADH dehydrogenase n=1 Tax=Novispirillum itersonii RepID=UPI0003789CA3 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_500_p_scaffold_450_30
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28939..30987
DNA (2049bp) protein (683aa)
NADH-quinone oxidoreductase chain 3 {ECO:0000313|EMBL:AIL65950.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AIL65950.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
NADH-quinone oxidoreductase, subunit G n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKV1_AZOBR
nuoG; NADH-quinone oxidoreductase, subunit G
Displaying items 1-30 of 44 in total

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