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SCNpilot_expt_500_p_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_32_1
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(434..1351)
DNA (918bp) protein (306aa)
hypothetical protein id=7716649 bin=BACIGN_2 species=Rhodopirellula europaea genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
SCNpilot_expt_500_p_scaffold_32_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(1755..3059)
DNA (1305bp) protein (435aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] id=7716650 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_expt_500_p_scaffold_32_3
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3074..4060)
DNA (987bp) protein (329aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EMR02451.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EMR02451.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
NADPH:quinone reductase id=7716651 bin=BACIGN_2 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
NADPH:quinone reductase rbh
SCNpilot_expt_500_p_scaffold_32_4
unknown

Not on your lists

4206..4493
DNA (288bp) protein (96aa)
id=7716652 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_expt_500_p_scaffold_32_5
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

4522..6897
DNA (2376bp) protein (792aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=7716653 bin=BACIGN_2 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Uncharacterized protein {ECO:0000313|EMBL:KER10399.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_500_p_scaffold_32_6
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6917..7495
DNA (579bp) protein (193aa)
hypothetical protein id=7716654 bin=BACIGN_2 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Type 1 periplasmic binding fold superfamily protein {ECO:0000313|EMBL:KJD31349.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_32_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

7560..9284
DNA (1725bp) protein (575aa)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=7716655 bin=BACIGN_2 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_expt_500_p_scaffold_32_8
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9281..10117
DNA (837bp) protein (279aa)
histidinol-phosphatase (EC:3.1.3.15); K04486 histidinol-phosphatase (PHP family) [EC:3.1.3.15] id=7716656 bin=BACIGN_2 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
histidinol-phosphatase (EC:3.1.3.15); K04486 histidinol-phosphatase (PHP family) [EC:3.1.3.15]
Histidinol phosphatase {ECO:0000313|EMBL:AJY74172.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
SCNpilot_expt_500_p_scaffold_32_9
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10129..11316)
DNA (1188bp) protein (396aa)
hypothetical protein id=7716657 bin=BACIGN_2 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Tax=GWA2_Deltaproteobacteria_54_12_curated
SCNpilot_expt_500_p_scaffold_32_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(11529..12569)
DNA (1041bp) protein (347aa)
WD40-like beta Propeller containing protein id=7716658 bin=BACIGN_2 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
WD40-like beta Propeller containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_500_p_scaffold_32_11
unknown

Not on your lists

comp(12590..13180)
DNA (591bp) protein (197aa)
id=7716659 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
SCNpilot_expt_500_p_scaffold_32_12
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13236..14861
DNA (1626bp) protein (542aa)
malate dehydrogenase (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] id=7716660 bin=BACIGN_2 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
malic protein NAD-binding protein rbh
Malic protein NAD-binding protein {ECO:0000313|EMBL:BAN26303.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_expt_500_p_scaffold_32_13
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(14874..16247)
DNA (1374bp) protein (458aa)
phosphodiesterase I; K01113 alkaline phosphatase D [EC:3.1.3.1] id=7716661 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
phosphodiesterase I; K01113 alkaline phosphatase D [EC:3.1.3.1] rbh
Phosphodiesterase I {ECO:0000313|EMBL:ACF14700.1}; Flags: Precursor;; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
SCNpilot_expt_500_p_scaffold_32_14
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16302..17081
DNA (780bp) protein (260aa)
amn; AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4] id=7716662 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
amn; AMP nucleosidase; K01241 AMP nucleosidase [EC:3.2.2.4] rbh
Tax=GWB2_Ignavibacteria_35_6b_curated
SCNpilot_expt_500_p_scaffold_32_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

17112..18278
DNA (1167bp) protein (389aa)
Dihydroorotate oxidase id=7716663 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_expt_500_p_scaffold_32_16
unknown

Not on your lists

comp(18309..18620)
DNA (312bp) protein (104aa)
id=7716664 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_expt_500_p_scaffold_32_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18617..19267)
DNA (651bp) protein (217aa)
NUDIX family hydrolase id=7716665 bin=BACIGN_2 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
NUDIX family hydrolase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_expt_500_p_scaffold_32_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

19389..20459
DNA (1071bp) protein (357aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] id=7716666 bin=BACIGN_2 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_expt_500_p_scaffold_32_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

20535..20957
DNA (423bp) protein (141aa)
hypothetical protein id=7716667 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_expt_500_p_scaffold_32_20
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

20995..21189
DNA (195bp) protein (65aa)
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 id=7716668 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_expt_500_p_scaffold_32_21
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(21301..22797)
DNA (1497bp) protein (499aa)
UDP-N-acetylmuramyl tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=7716669 bin=BACIGN_2 species=Dialister succinatiphilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
UDP-N-acetylmuramyl tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Tax=GWF2_RIF_IGX_33_9_curated
SCNpilot_expt_500_p_scaffold_32_22
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22794..23549)
DNA (756bp) protein (252aa)
integral membrane protein TerC id=7716670 bin=BACIGN_2 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
integral membrane protein TerC
Tax=RBG_16_Gamma2_60_9_curated
SCNpilot_expt_500_p_scaffold_32_23
unknown

Not on your lists

24014..24151
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_32_24
unknown

Not on your lists

24490..25509
DNA (1020bp) protein (340aa)
id=7716671 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
SCNpilot_expt_500_p_scaffold_32_25
unknown

Not on your lists

25542..25970
DNA (429bp) protein (143aa)
id=7716672 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_expt_500_p_scaffold_32_26
unknown

Not on your lists

comp(26165..26383)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_32_27
unknown

Not on your lists

comp(26622..26858)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_32_28
unknown

Not on your lists

comp(26851..27171)
DNA (321bp) protein (107aa)
id=7716674 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_expt_500_p_scaffold_32_29
unknown

Not on your lists

comp(27180..27635)
DNA (456bp) protein (152aa)
id=7716675 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
SCNpilot_expt_500_p_scaffold_32_30
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28036..29403
DNA (1368bp) protein (456aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] id=7716676 bin=BACIGN_2 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde dehydrogenase {ECO:0000313|EMBL:EDM79817.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
Displaying items 1-30 of 184 in total

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