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SCNpilot_expt_500_p_scaffold_1014

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1014_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..1728)
DNA (1728bp) protein (576aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ACU57692.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACU57692.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Peptidoglycan glycosyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD69_CHIPD
peptidoglycan glycosyltransferase; K05515 penicillin-binding protein 2
SCNpilot_expt_500_p_scaffold_1014_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1924..3939)
DNA (2016bp) protein (672aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB1_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEV99351.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_1014_3
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

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4099..6258
DNA (2160bp) protein (720aa)
Putative uncharacterized protein id=4663595 bin=GWF2_Bacteroidetes_39_10 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
SCNpilot_expt_500_p_scaffold_1014_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6422..7549
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000345E867 rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACU59422.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_1014_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7645..8346)
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP47_CHIPD
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU58744.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_1014_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8434..9447)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR75_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64314.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_1014_7
unknown

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comp(9595..10527)
DNA (933bp) protein (311aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1014_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10588..12237)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI53_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00670.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_1014_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12282..15365)
DNA (3084bp) protein (1028aa)
TPR repeat-containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG86_CHIPD
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACU59818.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_1014_10
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(15544..16242)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH80_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM35161.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
neutral zinc metallopeptidase; K06973
SCNpilot_expt_500_p_scaffold_1014_11
unknown

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16507..17448
DNA (942bp) protein (314aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1014_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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17461..19077
DNA (1617bp) protein (539aa)
Extracellular solute-binding protein family 5 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE02_CHIPD
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACU61502.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_1014_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19094..20110)
DNA (1017bp) protein (339aa)
Muconate cycloisomerase {ECO:0000313|EMBL:AEV98901.1}; EC=5.5.1.1 {ECO:0000313|EMBL:AEV98901.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Muconate cycloisomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR8_NIAKG
Muconate cycloisomerase
SCNpilot_expt_500_p_scaffold_1014_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20259..20945
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02335.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_1014_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21078..22295
DNA (1218bp) protein (406aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCL5_NIAKG
chromate ion transporter family chromate transporter; K07240 chromate transporter
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:AEW02555.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_1014_16

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22418..22624
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373AD3D
Uncharacterized protein {ECO:0000313|EMBL:KHD90213.1}; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1014_17
unknown

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22664..22822
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 17 items

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