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SCNpilot_expt_500_p_scaffold_2166

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2166_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(141..1409)
DNA (1269bp) protein (423aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM77_CHIPD
MiaB-like tRNA modifying protein
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ACU63982.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_2166_2
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

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comp(1624..2205)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003670D2A
hypothetical protein
Tax=RBG_13_OP11_40_15_curated
SCNpilot_expt_500_p_scaffold_2166_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2359..3450
DNA (1092bp) protein (364aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG76_NIAKG
ABC transporter; K02034 peptide/nickel transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEW02715.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_2166_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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3503..4276
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKR8_CHIPD rbh
hypothetical protein; K09125 hypothetical protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_500_p_scaffold_2166_5
Dokdonia sp. 4H-3-7-5, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4281..5150
DNA (870bp) protein (290aa)
Secreted protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4B0L7_KROS4
hypothetical protein
Secreted protein {ECO:0000313|EMBL:AEE20470.1}; Flags: Precursor;; TaxID=983548 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)).;"
SCNpilot_expt_500_p_scaffold_2166_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5155..6399
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYY0_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02462.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_500_p_scaffold_2166_7
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6415..7413
DNA (999bp) protein (333aa)
MoxR-like ATPase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLR5_SOLCM rbh
MoxR-like ATPase rbh
MoxR-like ATPase {ECO:0000313|EMBL:AFD09219.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_500_p_scaffold_2166_8
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7491..8543
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CH46_ELIME rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF16855.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_2166_9
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8773..9333
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR60_SOLCM
RNA polymerase sigma-70 factor, Bacteroides expansion family 1
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 {ECO:0000313|EMBL:AFD07266.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_500_p_scaffold_2166_10
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9346..10296
DNA (951bp) protein (317aa)
Anti-FecI sigma factor, FecR n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAI0_FLAJ1
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ABQ07789.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_p_scaffold_2166_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10351..12198
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCQ2_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU61401.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_2166_12
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12447..12773
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V5N9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR65171.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
Displaying 12 items

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