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SCNpilot_expt_500_p_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_59_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172..954)
DNA (783bp) protein (261aa)
SAM-dependent methyltransferase n=1 Tax=uncultured bacterium RepID=C5JB21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12509.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
conserved hypothetical protein; putative SAM-dependent methyltransferase
SCNpilot_expt_500_p_scaffold_59_2

Not on your lists

1276..1515
DNA (240bp) protein (80aa)
Excinuclease ABC C subunit protein n=1 Tax=uncultured bacterium RepID=K2C0U6_9BACT
Excinuclease ABC C subunit protein {ECO:0000313|EMBL:EKD74728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
excinuclease ABC C subunit domain-containing protein
SCNpilot_expt_500_p_scaffold_59_3
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1777..2235
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00037F934B
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACK51424.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_expt_500_p_scaffold_59_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2262..2663
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A763_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL96610.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_59_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2896..3957
DNA (1062bp) protein (354aa)
methylated-DNA/protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] rbh
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Paenibacillus vortex V453 RepID=E5YR27_9BACL rbh
Cysteine methyltransferase {ECO:0000313|EMBL:AIL12508.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_59_6
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4029..4379)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4VRZ1_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH95949.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio exovorus JSS.;"
SCNpilot_expt_500_p_scaffold_59_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4384..5136)
DNA (753bp) protein (251aa)
Pirin domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D611_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12507.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Pirin domain-containing protein; K06911
SCNpilot_expt_500_p_scaffold_59_8
unknown

Not on your lists

5199..6128
DNA (930bp) protein (310aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_59_9
unknown

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6628..7314
DNA (687bp) protein (229aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_59_10
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7380..8969)
DNA (1590bp) protein (530aa)
ATP-binding cassette, subfamily F, member 3 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT11_9PROT rbh
Putative ABC transporter ATP-binding protein YheS {ECO:0000313|EMBL:KKB96648.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
ATP-binding cassette protein
SCNpilot_expt_500_p_scaffold_59_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9071..9913
DNA (843bp) protein (281aa)
Ion transport protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TYZ2_MARPU
Uncharacterized protein {ECO:0000313|EMBL:AIL12504.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ion transporter; K08714 voltage-gated sodium channel
SCNpilot_expt_500_p_scaffold_59_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10005..11186
DNA (1182bp) protein (394aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12501.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_59_13
unknown

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comp(11373..11954)
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_59_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11957..13492)
DNA (1536bp) protein (512aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12500.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_59_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13667..15328)
DNA (1662bp) protein (554aa)
60 kDa chaperonin n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AH50_AZOBR rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
groEL; large subunit of chaperonin GroESL rbh
SCNpilot_expt_500_p_scaffold_59_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15359..15649)
DNA (291bp) protein (97aa)
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
chaperonin GroS, putative id=2744881 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
groES; co-chaperonin GroES; K04078 chaperonin GroES
SCNpilot_expt_500_p_scaffold_59_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16208..17533
DNA (1326bp) protein (442aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12496.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
major facilitator family transporter id=4025020 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
major facilitator family transporter transporter
SCNpilot_expt_500_p_scaffold_59_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17586..18860
DNA (1275bp) protein (425aa)
Major facilitator family transporter n=1 Tax=uncultured bacterium RepID=K2DX23_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12495.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
major facilitator family transporter
SCNpilot_expt_500_p_scaffold_59_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18912..19904
DNA (993bp) protein (331aa)
nucleoside-diphosphate-sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5B2_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:AIL12494.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_59_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19948..20721)
DNA (774bp) protein (258aa)
OsmC-like protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218F3_RHOPB
OsmC-like protein; K06889; K07397 putative redox protein
OsmC-like protein {ECO:0000313|EMBL:ABD87233.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_500_p_scaffold_59_21

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comp(20756..22057)
DNA (1302bp) protein (434aa)
MFS transporter protein n=1 Tax=uncultured bacterium RepID=K2EIQ7_9BACT rbh
MFS transporter protein {ECO:0000313|EMBL:EKE10068.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
major facilitator transporter; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
SCNpilot_expt_500_p_scaffold_59_22
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22274..24631
DNA (2358bp) protein (786aa)
DNA segregation ATPase FtsK/SpoIIIE n=1 Tax=Oceanibaculum indicum P24 RepID=K2K6U8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL12493.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ftsK; DNA translocase
SCNpilot_expt_500_p_scaffold_59_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24649..25248
DNA (600bp) protein (200aa)
cell envelope biogenesis protein LolA n=1 Tax=Thalassospira lucentensis RepID=UPI0003B77936
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Outer membrane lipoprotein-sorting protein
SCNpilot_expt_500_p_scaffold_59_24
unknown

Not on your lists

25332..25466
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_59_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25597..28560)
DNA (2964bp) protein (988aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12491.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_59_26
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28601..29215)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER19_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05671.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_expt_500_p_scaffold_59_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29212..29877)
DNA (666bp) protein (222aa)
Putative hydrolase, HAD superfamily n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIU1_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIL12490.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative hydrolase, HAD superfamily
SCNpilot_expt_500_p_scaffold_59_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30016..32376)
DNA (2361bp) protein (787aa)
PREDICTED: uncharacterized protein LOC101071056 n=1 Tax=Takifugu rubripes RepID=UPI000298ADF2
Uncharacterized protein {ECO:0000313|EMBL:AIL12489.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
uncharacterized LOC101071056
SCNpilot_expt_500_p_scaffold_59_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32815..34002
DNA (1188bp) protein (396aa)
Integrase family protein n=1 Tax=uncultured bacterium RepID=K2EJZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL13458.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
integrase family protein
SCNpilot_expt_500_p_scaffold_59_30

Not on your lists

34143..35186
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z8H7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD45526.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
UDP-N-acetylglucosamine 2-epimerase rbh
Displaying items 1-30 of 193 in total

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