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SCNpilot_expt_500_p_scaffold_2301

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2301_1
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(52..264)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSD4_9CHLB
hypothetical protein; K07133
Tax=GWD2_Desulfuromonadales_54_10_curated
SCNpilot_expt_500_p_scaffold_2301_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1150..1446)
DNA (297bp) protein (99aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI00034CC5B7
Uncharacterized protein {ECO:0000313|EMBL:AIL12601.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ycaN2; HTH-type transcriptional regulator YcaN
SCNpilot_expt_500_p_scaffold_2301_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1792..2124)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B507
Uncharacterized protein {ECO:0000313|EMBL:AIL12602.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2301_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2129..2482)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13480.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2301_5
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3139..4263
DNA (1125bp) protein (375aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5B6_9BACI
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:EGL83451.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
ltrA; group II intron-encoded protein ltrA rbh
SCNpilot_expt_500_p_scaffold_2301_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4393..7950
DNA (3558bp) protein (1186aa)
conjugal transfer protein TraA n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B77F rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL12605.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
traA; Ti-type conjugative transfer relaxase TraA
SCNpilot_expt_500_p_scaffold_2301_7
unknown

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8089..8277
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2301_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8344..8718
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12608.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2301_9
unknown

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comp(8831..9334)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2301_10
unknown

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comp(9599..9844)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2301_11
unknown

Not on your lists

comp(9887..10159)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2301_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10483..11052)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12861.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2301_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11039..12721)
DNA (1683bp) protein (561aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2FH01_9BACT
conjugative transfer protein TraD rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_p_scaffold_2301_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12776..13357
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13436.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2301_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13329..15140)
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF7D
Uncharacterized protein {ECO:0000313|EMBL:AIL13435.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
traG; conjugative transfer protein traG; K12056 conjugal transfer mating pair stabilization protein TraG
Displaying 15 items

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