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SCNpilot_expt_500_p_scaffold_4147

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4147_1
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

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39..1574
DNA (1536bp) protein (512aa)
Protein related to deoxyribodipyrimidine photolyase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VH40_9PROT rbh
Protein related to deoxyribodipyrimidine photolyase rbh
Protein related to deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AGH98702.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_expt_500_p_scaffold_4147_2
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1738..2250)
DNA (513bp) protein (171aa)
tryptophan-rich sensory protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ABD5
integral membrane protein; K07185 tryptophan-rich sensory protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_500_p_scaffold_4147_3
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2332..2571)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B62DBD
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
SCNpilot_expt_500_p_scaffold_4147_4
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2568..3266)
DNA (699bp) protein (233aa)
Uncharacterized protein n=5 Tax=Legionella pneumophila RepID=Q5X8G2_LEGPA
hypothetical protein
2-(S)-hydroxypropyl-CoM dehydrogenase {ECO:0000313|EMBL:GAN25366.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_500_p_scaffold_4147_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3374..3721)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU25_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06727.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_expt_500_p_scaffold_4147_6
unknown

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comp(3791..3949)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4147_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4065..4910)
DNA (846bp) protein (282aa)
Transcriptional regulator, LysR family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHZ2_SPILD
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB36880.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_500_p_scaffold_4147_8
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5523..6515)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QMG9_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EGF91410.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
hypothetical protein; K07086
SCNpilot_expt_500_p_scaffold_4147_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7244..7498)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13633.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_4147_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7742..8287
DNA (546bp) protein (182aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AC4C
PAS/PAC sensor signal transduction histidine kinase
Displaying 10 items

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