name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_74_1
unknown
|
Not on your lists |
comp(2..79)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_74_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(281..1015)
|
Acyl-CoA hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R6_9GAMM
Acyl-CoA hydrolase {ECO:0000313|EMBL:EIL93757.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA hydrolase
|
|
SCNpilot_expt_500_p_scaffold_74_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1050..3053)
|
Peptidase t2 asparaginase 2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R9_9GAMM
rbh
Peptidase t2 asparaginase 2 {ECO:0000313|EMBL:EIL93760.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
|
|
SCNpilot_expt_500_p_scaffold_74_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3201..3800
|
Two-component system regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S0_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EYR67012.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
two-component system regulatory protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_500_p_scaffold_74_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3778..4809
|
histidine kinase n=1 Tax=Xanthomonas sacchari RepID=UPI00026300E7
Two-component system sensor protein {ECO:0000313|EMBL:EIL93762.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Fe2+-dicitrate sensor, membrane component
|
|
SCNpilot_expt_500_p_scaffold_74_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4899..7958
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D6735
TonB-dependent receptor
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
|
|
SCNpilot_expt_500_p_scaffold_74_7 |
Not on your lists |
7951..10023
|
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=mine drainage metagenome RepID=T1CBY4_9ZZZZ
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EQD64105.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peptidase S9 prolyl oligopeptidase
|
|
SCNpilot_expt_500_p_scaffold_74_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10119..11210)
|
GTP-binding protein YchF n=1 Tax=Dyella japonica RepID=UPI0002F60E30
rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
GTP-binding protein YchF
rbh
|
|
SCNpilot_expt_500_p_scaffold_74_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11294..11878)
|
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S4_9GAMM
|
|
SCNpilot_expt_500_p_scaffold_74_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11933..12607)
|
50S ribosomal protein L25 n=1 Tax=Dyella ginsengisoli RepID=UPI000345573A
rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ribosomal protein L25, Ctc-form
rbh
|
|
SCNpilot_expt_500_p_scaffold_74_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12773..13714)
|
ribose-phosphate pyrophosphokinase n=1 Tax=Dyella ginsengisoli RepID=UPI00037B470F
rbh
ribose-phosphate pyrophosphokinase
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_p_scaffold_74_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13950..15347)
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W539_9GAMM
rbh
|
|
SCNpilot_expt_500_p_scaffold_74_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15376..15981)
|
Outer membrane lipoprotein LolB n=1 Tax=Rhodanobacter sp. 115 RepID=I4W540_9GAMM
rbh
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
outer membrane lipoprotein LolB
rbh
|
|
SCNpilot_expt_500_p_scaffold_74_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15978..17777)
|
Flp pilus assembly protein TadD n=1 Tax=Rhodanobacter denitrificans RepID=M4NK11_9GAMM
Flp pilus assembly protein TadD
Flp pilus assembly protein TadD {ECO:0000313|EMBL:AGG88111.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_74_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17845..19122
|
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutamyl-tRNA reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WG32_9GAMM
|
|
SCNpilot_expt_500_p_scaffold_74_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19204..20283
|
Peptide chain release factor 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T1_9GAMM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterial peptide chain release factor 1 (bRF-1)
|
|
SCNpilot_expt_500_p_scaffold_74_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20345..21115
|
Polyphosphate kinase 2, PA0141 family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T2_9GAMM
rbh
Polyphosphate kinase {ECO:0000313|EMBL:AHX14301.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
polyphosphate kinase 2, PA0141 family
rbh
|
|
SCNpilot_expt_500_p_scaffold_74_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21126..21392)
|
Acylphosphatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ21_9GAMM
Acylphosphatase {ECO:0000313|EMBL:EIL87212.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
acylphosphatase
|
|
SCNpilot_expt_500_p_scaffold_74_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21392..21871)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EFC18D
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EIM02682.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
thiol-disulfide isomerase-like thioredoxin
|
|
SCNpilot_expt_500_p_scaffold_74_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21868..23142)
|
hypothetical protein (EC:3.1.-.-)
UPF0761 membrane protein rbn n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKP0_9GAMM
UPF0761 membrane protein rbn {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_expt_500_p_scaffold_74_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23325..23924
|
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ18_9GAMM
rbh
NAD(P)H:quinone oxidoreductase, type IV
|
|
SCNpilot_expt_500_p_scaffold_74_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23921..24268
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT93_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02685.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_74_23
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24300..24767
|
cupin n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002E8D9D7
Cupin {ECO:0000313|EMBL:AHX14309.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cupin
|
|
SCNpilot_expt_500_p_scaffold_74_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24914..26554
|
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT95_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIM02687.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyl-CoA dehydrogenase
|
|
SCNpilot_expt_500_p_scaffold_74_25
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
26554..27111
|
Adenylate kinase-like kinase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKG4_TERRK
adenylate kinase-like kinase
Adenylate kinase-like kinase {ECO:0000313|EMBL:AFL89732.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
|
|
SCNpilot_expt_500_p_scaffold_74_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27196..27687
|
L-asparaginase/GlutRNAGln amidotransferase subunit D (EC:3.5.1.1)
Putative asparaginase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT97_9GAMM
rbh
Putative asparaginase {ECO:0000313|EMBL:EIM02689.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
|
|
SCNpilot_expt_500_p_scaffold_74_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27794..29089)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C8E8F
rbh
Transporter {ECO:0000313|EMBL:AHX13567.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane efflux protein
|
|
SCNpilot_expt_500_p_scaffold_74_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29086..29397)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDCF1
Uncharacterized protein {ECO:0000313|EMBL:AHX13568.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_74_29
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29401..32472)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FF74
rbh
Cytochrome C peroxidase {ECO:0000313|EMBL:KGI76679.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
CzcA family heavy metal efflux protein
|
|
SCNpilot_expt_500_p_scaffold_74_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32474..33502)
|
Efflux transporter, RND family, MFP subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTT4_DELAS
Uncharacterized protein {ECO:0000313|EMBL:AHX16306.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
RND family efflux transporter MFP subunit
|
Name | Ratio |
---|---|
Rhodanobacter | 58.94% |
Dyella | 12.58% |
unknown | 11.26% |
Oleiagrimonas | 3.31% |
Arenimonas | 2.65% |
Xanthomonas | 1.99% |
Scytonema | 1.32% |
Lysobacter | 1.32% |
Xylella | 0.66% |
Terriglobus | 0.66% |
Stenotrophomonas | 0.66% |
Pseudomonas | 0.66% |
Hydrocarboniphaga | 0.66% |
Escherichia | 0.66% |
Aquabacterium | 0.66% |
Anaerotruncus | 0.66% |
Achromobacter | 0.66% |
Acetobacter | 0.66% |