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SCNpilot_expt_500_p_scaffold_254

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Displaying items 1-30 of 109 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_254_1
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1364
DNA (1362bp) protein (454aa)
Putative outer membrane protein n=1 Tax=Burkholderia pseudomallei (strain 668) RepID=A3N9P1_BURP6
Coiled stalk of trimeric autotransporter adhesin family protein {ECO:0000313|EMBL:KGW14768.1}; TaxID=1435370 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR4000.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1488..2318
DNA (831bp) protein (277aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SLW4_STRM5
Membrane protein {ECO:0000313|EMBL:AHX13750.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
OmpA/MotB domain-containing protein
SCNpilot_expt_500_p_scaffold_254_3
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2396..2791)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WG05_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EEA02701.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3133..5337
DNA (2205bp) protein (735aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Polyphosphate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWQ0_9GAMM rbh
polyphosphate kinase 1 rbh
SCNpilot_expt_500_p_scaffold_254_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5390..5947)
DNA (558bp) protein (186aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTL8_9GAMM rbh
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EIL90559.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
NADPH-dependent FMN reductase
SCNpilot_expt_500_p_scaffold_254_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6039..6587)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003147423
C-lysozyme inhibitor {ECO:0000313|EMBL:AHX12668.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Inhibitor of vertebrate lysozyme (Ivy)
SCNpilot_expt_500_p_scaffold_254_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6666..7073)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W567_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94608.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7217..8059
DNA (843bp) protein (281aa)
Putative methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIV5_9GAMM rbh
putative methyltransferase rbh
Putative methyltransferase {ECO:0000313|EMBL:AGG89603.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_254_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8080..9669)
DNA (1590bp) protein (530aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
carboxylesterase (EC:3.1.1.1); K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylesterase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W583_9GAMM rbh
SCNpilot_expt_500_p_scaffold_254_10
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(9760..10236)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D154F
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
SCNpilot_expt_500_p_scaffold_254_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10270..10710)
DNA (441bp) protein (147aa)
glyoxalase n=1 Tax=Dyella ginsengisoli RepID=UPI0003469BAC
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL94631.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_500_p_scaffold_254_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10707..11156)
DNA (450bp) protein (150aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W591_9GAMM
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL94632.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AraC family transcriptional regulator
SCNpilot_expt_500_p_scaffold_254_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11234..12805)
DNA (1572bp) protein (524aa)
Peptidase M28 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE2_9GAMM rbh
Peptidase M28 {ECO:0000313|EMBL:EIL96783.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
peptidase M28 rbh
SCNpilot_expt_500_p_scaffold_254_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13272..14309
DNA (1038bp) protein (346aa)
Dihydroorotase {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189352}; EC=3.5.2.3 {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189348};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] rbh
Dihydroorotase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQN8_9GAMM rbh
SCNpilot_expt_500_p_scaffold_254_15
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14557..15366
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5Y3_THIK1
Uncharacterized protein {ECO:0000313|EMBL:KGM52630.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15374..16729)
DNA (1356bp) protein (452aa)
Voltage-gated chloride channel n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE3_9GAMM rbh
Voltage-gated chloride channel {ECO:0000313|EMBL:EIL96784.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chloride channel protein EriC
SCNpilot_expt_500_p_scaffold_254_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17117..19006)
DNA (1890bp) protein (630aa)
Putative lipoprotein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIN0_9GAMM rbh
Putative lipoprotein {ECO:0000313|EMBL:EIL87071.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative lipoprotein rbh
SCNpilot_expt_500_p_scaffold_254_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19327..20631)
DNA (1305bp) protein (435aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9]
peptidase M24 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F349 rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCNpilot_expt_500_p_scaffold_254_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20783..21163
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A92BB
Uncharacterized protein {ECO:0000313|EMBL:AHX13074.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein; K00389 putative membrane protein
SCNpilot_expt_500_p_scaffold_254_20
unknown

Not on your lists

comp(21139..21339)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_254_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21495..22160
DNA (666bp) protein (222aa)
DSBA oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS0_9GAMM
DSBA oxidoreductase {ECO:0000313|EMBL:EIL90611.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative dithiol-disulfide isomerase involved in polyketide biosynthesis
SCNpilot_expt_500_p_scaffold_254_22
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22206..22919)
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC87086.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
id=2608851 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCNpilot_expt_500_p_scaffold_254_23
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23134..25782
DNA (2649bp) protein (883aa)
Putative alpha-glucosidase, glycosylhydrolase n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LG23_BACFN rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV36366.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
alpha-glucosidase rbh
SCNpilot_expt_500_p_scaffold_254_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25883..26227)
DNA (345bp) protein (115aa)
aminoacrylate peracid reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI000374998D
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIL90642.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative translation initiation inhibitor, yjgF family
SCNpilot_expt_500_p_scaffold_254_25
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26357..26869)
DNA (513bp) protein (171aa)
thermoresistant glucokinase family carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12]
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003466CE7
Carbohydrate kinase, thermoresistant glucokinase family {ECO:0000313|EMBL:AFC87419.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_expt_500_p_scaffold_254_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26986..27774
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96788.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27918..29069
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX27_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91768.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_28
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29379..30677
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX26_9GAMM rbh
Membrane protein {ECO:0000313|EMBL:KGM51840.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30674..30937
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX25_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91766.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_254_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31504..32520
DNA (1017bp) protein (339aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVJ0_9GAMM rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EIM03482.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
Displaying items 1-30 of 109 in total

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