name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_280_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(135..1082)
|
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Methionyl-tRNA formyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VX46_9GAMM
rbh
methionyl-tRNA formyltransferase
|
|
SCNpilot_expt_500_p_scaffold_280_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1079..1597)
|
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGN0_9GAMM
|
|
SCNpilot_expt_500_p_scaffold_280_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1725..2849
|
LysM domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VX44_9GAMM
rbh
LysM domain-containing protein {ECO:0000313|EMBL:EIL91785.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
LysM domain-containing protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_280_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2932..4062
|
DNA protecting protein DprA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM8_9GAMM
rbh
DNA protecting protein DprA {ECO:0000313|EMBL:EIL98619.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA protecting protein DprA
rbh
|
|
SCNpilot_expt_500_p_scaffold_280_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4199..6688
|
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DNA topoisomerase I n=1 Tax=Dyella ginsengisoli RepID=UPI0003487771
rbh
DNA topoisomerase I, bacterial
|
|
SCNpilot_expt_500_p_scaffold_280_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6688..7260
|
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; Flags: Precursor
Threonylcarbamoyl-AMP synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIL5_9GAMM
putative translation factor (SUA5)
|
|
SCNpilot_expt_500_p_scaffold_280_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7560..8966
|
AMP-ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDQ9_9GAMM
rbh
AMP-ligase {ECO:0000313|EMBL:EIL97600.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyl-CoA synthetase/AMP-acid ligase
|
|
SCNpilot_expt_500_p_scaffold_280_8
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
comp(9006..10163)
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000374DA94
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV81149.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
|
|
SCNpilot_expt_500_p_scaffold_280_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10323..11603
|
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDQ8_9GAMM
rbh
phosphoribosylamine--glycine ligase
|
|
SCNpilot_expt_500_p_scaffold_280_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12095..13741)
|
Phosphoglucomutase {ECO:0000313|EMBL:EIL90873.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EIL90873.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoglucomutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI2_9GAMM
phosphoglucomutase, alpha-D-glucose phosphate-specific
|
|
SCNpilot_expt_500_p_scaffold_280_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13738..15405)
|
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glucose-6-phosphate isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH7_9GAMM
rbh
glucose-6-phosphate isomerase
rbh
|
|
SCNpilot_expt_500_p_scaffold_280_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15402..16505)
|
transaldolase (EC:2.2.1.2)
rbh
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Transaldolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMT8_9GAMM
rbh
|
|
SCNpilot_expt_500_p_scaffold_280_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16538..17245)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WND9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90957.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_280_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17239..18642)
|
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
rbh
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNE0_9GAMM
rbh
|
|
SCNpilot_expt_500_p_scaffold_280_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18881..19225)
|
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HVN8_PSEST
Uncharacterized protein {ECO:0000313|EMBL:KGF83322.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_280_16
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(19338..19724)
|
epimerase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A0989D
Uncharacterized protein {ECO:0000313|EMBL:ELT44589.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
hypothetical protein; K08987 putative membrane protein
|
|
SCNpilot_expt_500_p_scaffold_280_17
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19784..20530)
|
methionine aminopeptidase n=1 Tax=Singularimonas variicoloris RepID=UPI0003756394
rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
|
|
SCNpilot_expt_500_p_scaffold_280_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20898..21251)
|
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUE5_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED65629.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_280_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21495..30098)
|
Cellobiose phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ6_9GAMM
rbh
Cellobiose phosphorylase {ECO:0000313|EMBL:AGG90923.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
cellobiose phosphorylase
rbh
|
|
SCNpilot_expt_500_p_scaffold_280_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30256..30705
|
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP7_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL89188.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
|
|
SCNpilot_expt_500_p_scaffold_280_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30719..32296)
|
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP6_9GAMM
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL89187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
|
|
SCNpilot_expt_500_p_scaffold_280_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32300..33301)
|
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ8_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:AHX15370.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
|
|
SCNpilot_expt_500_p_scaffold_280_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33356..34489)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP5_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89186.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_280_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34574..35950
|
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKU8_9GAMM
acetyl-CoA acetyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_p_scaffold_280_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36018..36572
|
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ0_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG90918.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_280_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36632..36856)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY32_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_p_scaffold_280_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36950..37600)
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Y1_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95572.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_280_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37743..38486
|
phosphoglycerate mutase (EC:5.4.2.1)
rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF95_9GAMM
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_p_scaffold_280_29
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
38815..39825
|
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003782DDE
Transcriptional regulator TrmB {ECO:0000313|EMBL:AKH81192.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
putative LuxR family transcriptional regulator
|
|
SCNpilot_expt_500_p_scaffold_280_30
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40062..42404
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031B6116
rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF45785.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Peptidase S53 propeptide
rbh
|