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SCNpilot_expt_500_p_scaffold_316

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Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_316_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1726)
DNA (1725bp) protein (575aa)
Nitric-oxide reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY9_9GAMM
Nitric-oxide reductase {ECO:0000313|EMBL:EIM02931.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nitric oxide reductase large subunit
SCNpilot_expt_500_p_scaffold_316_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1945..2391)
DNA (447bp) protein (149aa)
Blue (Type 1) copper domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D0_9GAMM
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:EIL93271.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
azurin
SCNpilot_expt_500_p_scaffold_316_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2613..5261
DNA (2649bp) protein (883aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter denitrificans RepID=M4NCV9_9GAMM rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:AGG87273.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_316_4

Not on your lists

5356..6048
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=mine drainage metagenome RepID=T0ZKK0_9ZZZZ rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EQD29259.1}; Two-component response regulator {ECO:0000313|EMBL:EQD65152.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
SCNpilot_expt_500_p_scaffold_316_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6045..7424
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Two-component sensor histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR7_9GAMM rbh
signal transduction histidine kinase rbh
SCNpilot_expt_500_p_scaffold_316_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7474..8472
DNA (999bp) protein (333aa)
YVTN family beta-propeller repeat protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NA59_9GAMM rbh
YVTN family beta-propeller repeat protein rbh
YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:AGG87274.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_316_7
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8701..10101)
DNA (1401bp) protein (467aa)
Major facilitator superfamily MFS_1 n=2 Tax=Acidiphilium RepID=A5FYE0_ACICJ rbh
MFS transporter {ECO:0000313|EMBL:KHD19929.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
major facilitator transporter; K08369 MFS transporter, putative metabolite:H+ symporter rbh
SCNpilot_expt_500_p_scaffold_316_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10246..13269)
DNA (3024bp) protein (1008aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037391DF rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACB73992.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_expt_500_p_scaffold_316_9
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13391..14476)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q5D2_9RHOO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL27195.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_500_p_scaffold_316_10
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14485..16320)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036433EB rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK55864.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_316_11
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16688..17347
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036FEF36 rbh
cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator rbh
Two-component system, OmpR family, copper resistance phosphate regulon response regulator {ECO:0000313|EMBL:BAL27202.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_500_p_scaffold_316_12
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17344..18723
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Two-component system, OmpR family, heavy metal sensor histidine kinase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q5E0_9RHOO rbh
cusS; two-component system, OmpR family, heavy metal sensor histidine kinase rbh
SCNpilot_expt_500_p_scaffold_316_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18883..20907
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJH3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX13544.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_316_14
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20980..22524)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PIH2_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ85180.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family
SCNpilot_expt_500_p_scaffold_316_15
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22521..23159)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NTN3_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85182.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_316_16
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23156..24256)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4R1A7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85178.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
iron-regulated membrane protein
SCNpilot_expt_500_p_scaffold_316_17
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24407..25204)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PAW5_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85181.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
AraC family transcriptional regulator
SCNpilot_expt_500_p_scaffold_316_18
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25515..26510
DNA (996bp) protein (332aa)
Putative acetyl esterase n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MCE6_BORPB
Esterase/lipase {ECO:0000313|EMBL:AJA08304.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
acetyl esterase
SCNpilot_expt_500_p_scaffold_316_19
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26754..28946
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NTM9_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ85177.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
outer membrane receptor (OMR) family protein rbh
SCNpilot_expt_500_p_scaffold_316_20
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28956..30401
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PAW1_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ85176.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
amidohydrolase
SCNpilot_expt_500_p_scaffold_316_21
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30391..31707
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PIG7_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ85175.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
amidohydrolase
SCNpilot_expt_500_p_scaffold_316_22
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31755..34994
DNA (3240bp) protein (1080aa)
Amidohydrolase family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VP15_9SPHN rbh
Amidohydrolase family protein {ECO:0000313|EMBL:EJU12335.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
amidohydrolase family protein rbh
SCNpilot_expt_500_p_scaffold_316_23
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35004..35825
DNA (822bp) protein (274aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU9_9GAMM
pyrroline-5-carboxylate reductase
SCNpilot_expt_500_p_scaffold_316_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36087..37070
DNA (984bp) protein (328aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=mine drainage metagenome RepID=T1AUJ7_9ZZZZ rbh
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
SCNpilot_expt_500_p_scaffold_316_25
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37074..38087
DNA (1014bp) protein (338aa)
GTP cyclohydrolase subunit MoaC n=1 Tax=Rhodanobacter denitrificans RepID=M4NGD3_9GAMM
Molybdopterin-guanine dinucleotide biosynthesis protein MoaC {ECO:0000313|EMBL:KGI79009.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
GTP cyclohydrolase subunit MoaC
SCNpilot_expt_500_p_scaffold_316_26
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38084..39337
DNA (1254bp) protein (418aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGH5_9GAMM rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:BAP89056.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
molybdenum cofactor synthesis domain protein rbh
SCNpilot_expt_500_p_scaffold_316_27
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39334..39594
DNA (261bp) protein (87aa)
Sulfur transfer protein ThiS n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTW7_9GAMM
Sulfur transfer protein ThiS {ECO:0000313|EMBL:BAP89057.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_316_28
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39596..40093
DNA (498bp) protein (166aa)
moaE; putative molydopterin converting factor subunit 2 protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Putative molydopterin converting factor subunit 2 protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FUL6_STRMK
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:BAP89058.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCNpilot_expt_500_p_scaffold_316_29
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40077..40649
DNA (573bp) protein (191aa)
hypothetical protein; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77]
molybdopterin-guanine dinucleotide biosynthesis protein A n=2 Tax=Xanthomonas campestris RepID=UPI0001CC06BC
Molybdenum cofactor guanylyltransferase {ECO:0000313|EMBL:BAP89059.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCNpilot_expt_500_p_scaffold_316_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40646..40996
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2I6_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ46243.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Displaying items 1-30 of 71 in total

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