name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_421_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(291..494)
|
Carbon storage regulator homolog n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W444_9GAMM
carbon storage regulator CsrA
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
|
|
SCNpilot_expt_500_p_scaffold_421_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(760..3399)
|
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
rbh
Alanine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W445_9GAMM
rbh
|
|
SCNpilot_expt_500_p_scaffold_421_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3463..3981)
|
Regulatory protein RecX n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W446_9GAMM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_421_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4089..4637)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D2A17
Uncharacterized protein {ECO:0000313|EMBL:AHX12589.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
beta-lactamase hydrolase-like protein
|
|
SCNpilot_expt_500_p_scaffold_421_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4703..5740)
|
recombinase RecA n=1 Tax=Dyella japonica RepID=UPI00031954A7
rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
protein RecA
|
|
SCNpilot_expt_500_p_scaffold_421_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5856..6365)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUG3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03105.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
competence/damage-inducible protein CinA-like protein
|
|
SCNpilot_expt_500_p_scaffold_421_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6440..9013
|
DNA mismatch repair protein MutS n=1 Tax=Rhodanobacter sp. 115 RepID=I4W258_9GAMM
rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DNA mismatch repair protein MutS
|
|
SCNpilot_expt_500_p_scaffold_421_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9005..9613)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CA753
Response regulator receiver {ECO:0000313|EMBL:EIL94243.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
|
|
SCNpilot_expt_500_p_scaffold_421_9
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria
|
Not on your lists |
comp(9705..10289)
|
riboflavin biosynthesis protein ribD (EC:1.1.1.193) id=1245029 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
riboflavin biosynthesis protein ribD (EC:1.1.1.193)
Tax=RBG_16_Caldithrix_48_16_curated
|
|
SCNpilot_expt_500_p_scaffold_421_10
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10312..10947)
|
glutathione S-transferase domain; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TBN9_BURPP
Glutathione S-transferase domain {ECO:0000313|EMBL:ACD19691.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
|
|
SCNpilot_expt_500_p_scaffold_421_11
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11057..11647
|
Transcriptional regulator n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EZY6_9RHOB
Transcriptional regulator {ECO:0000313|EMBL:EBA14803.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-2-6.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_500_p_scaffold_421_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12135..15305
|
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter sp. 115 RepID=I4VP79_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL89020.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
outer membrane receptor protein
|
|
SCNpilot_expt_500_p_scaffold_421_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15457..16002)
|
Response regulator receiver protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W255_9GAMM
Response regulator receiver protein {ECO:0000313|EMBL:EIL93546.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
|
|
SCNpilot_expt_500_p_scaffold_421_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16124..16498)
|
Ribosome-associated heat shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY96_9GAMM
ribosome-associated heat shock protein implicated in recycling of 50S subunit
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_421_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16671..17576)
|
Putative permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W253_9GAMM
rbh
Putative permease {ECO:0000313|EMBL:EIL93544.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative permease
|
|
SCNpilot_expt_500_p_scaffold_421_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17695..17997
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92906.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_421_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18098..18670
|
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3M6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94067.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
|
|
SCNpilot_expt_500_p_scaffold_421_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18743..20611)
|
Chaperone protein HtpG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD7_9GAMM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
molecular chaperone of HSP90 family
|
|
SCNpilot_expt_500_p_scaffold_421_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20714..21616)
|
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Protease HtpX n=1 Tax=Rhodanobacter sp. 115 RepID=I4W938_9GAMM
rbh
Heat shock protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_421_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21744..22610
|
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD5_9GAMM
rbh
glutamyl-queuosine tRNA(Asp) synthetase
rbh
|
|
SCNpilot_expt_500_p_scaffold_421_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22774..23514
|
Acetoacetyl-CoA reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD4_9GAMM
rbh
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EIM03076.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_expt_500_p_scaffold_421_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23635..25011
|
PAS and GAF sensor-containing diguanylate cyclase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W559_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:AHX15487.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
|
|
SCNpilot_expt_500_p_scaffold_421_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25018..25818)
|
Dinucleotide-utilizing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P1_9GAMM
Dinucleotide-utilizing protein {ECO:0000313|EMBL:EIL94082.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
|
|
SCNpilot_expt_500_p_scaffold_421_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25947..26336
|
Cytochrome C n=1 Tax=Rhodanobacter denitrificans RepID=I4WY76_9GAMM
cytochrome c556
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_p_scaffold_421_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26349..26651)
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W944_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94084.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_421_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26662..27534)
|
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ77_9GAMM
rbh
Pirin-related protein
rbh
Pirin-related protein {ECO:0000313|EMBL:AGG89743.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_421_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27548..28606)
|
NADH:flavin oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT0_9GAMM
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AGG89744.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_500_p_scaffold_421_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28840..29049)
|
Cold shock protein n=2 Tax=Rhodanobacter RepID=I4WY71_9GAMM
cold shock protein
Cold shock protein {ECO:0000313|EMBL:EIM03068.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
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SCNpilot_expt_500_p_scaffold_421_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29391..29600)
|
Cold shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY70_9GAMM
cold shock protein
Cold shock protein {ECO:0000313|EMBL:AGG89747.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_500_p_scaffold_421_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29850..30212
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY69_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX12558.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
|