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SCNpilot_expt_500_p_scaffold_584

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_584_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..319
DNA (318bp) protein (106aa)
Microcin-processing peptidase 2 n=1 Tax=Rhodanobacter denitrificans RepID=M4NBY4_9GAMM
microcin-processing peptidase 2
Microcin-processing peptidase 2 {ECO:0000313|EMBL:AGG88170.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_584_2
unknown

Not on your lists

449..847
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_584_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(787..1308)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSL7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02459.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_p_scaffold_584_4
unknown

Not on your lists

comp(1368..1541)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_584_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2164..2625
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ96_9GAMM
SCNpilot_expt_500_p_scaffold_584_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2625..3071
DNA (447bp) protein (149aa)
N utilization substance protein B homolog n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTP2_9GAMM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcription antitermination factor NusB
SCNpilot_expt_500_p_scaffold_584_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3068..3613
DNA (546bp) protein (182aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTP1_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL90582.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
N-acetyltransferase GCN5
SCNpilot_expt_500_p_scaffold_584_8
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3623..4084)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372CA9F
Uncharacterized protein {ECO:0000313|EMBL:KJV26269.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_584_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4217..5185
DNA (969bp) protein (323aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Thiamine-monophosphate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ93_9GAMM rbh
thiamine-phosphate kinase rbh
SCNpilot_expt_500_p_scaffold_584_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5182..5691
DNA (510bp) protein (170aa)
phosphatidylglycerophosphatase A-like protein (EC:3.1.3.27)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphatidylglycerophosphatase A-like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDJ4_9GAMM
SCNpilot_expt_500_p_scaffold_584_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5696..6640)
DNA (945bp) protein (315aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZA5_9GAMM rbh
nucleoside-diphosphate-sugar epimerase rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG87948.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_584_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6731..7639
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003716FDD rbh
LysR family transcriptional regulator rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_584_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7647..9137)
DNA (1491bp) protein (497aa)
Alpha-L-fucosidase (EC:3.2.1.51) rbh
Alpha-L-fucosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTN8_9GAMM rbh
Alpha-L-fucosidase {ECO:0000313|EMBL:EIL90579.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_500_p_scaffold_584_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9367..10335
DNA (969bp) protein (323aa)
Voltage-gated potassium channel beta subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ90_9GAMM
Voltage-gated potassium channel beta subunit {ECO:0000313|EMBL:EIL99531.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
SCNpilot_expt_500_p_scaffold_584_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10426..10650
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000313D6AA
Hemin transporter HemP {ECO:0000313|EMBL:AIF49263.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hemin uptake protein
SCNpilot_expt_500_p_scaffold_584_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10764..11324
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTN2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90573.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_584_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11496..12767
DNA (1272bp) protein (424aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTN0_9GAMM rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL90571.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
RND family efflux transporter, MFP subunit rbh
SCNpilot_expt_500_p_scaffold_584_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12851..13576
DNA (726bp) protein (242aa)
Antimicrobial peptide ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM9_9GAMM rbh
Antimicrobial peptide ABC transporter ATPase {ECO:0000313|EMBL:EIL90570.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, ATPase component
SCNpilot_expt_500_p_scaffold_584_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13612..14958
DNA (1347bp) protein (449aa)
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM8_9GAMM rbh
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EIL90569.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
type I secretion outer membrane protein, TolC family
SCNpilot_expt_500_p_scaffold_584_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15096..16406
DNA (1311bp) protein (437aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM7_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90568.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_expt_500_p_scaffold_584_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16417..17658
DNA (1242bp) protein (414aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM6_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90567.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_expt_500_p_scaffold_584_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17699..19015
DNA (1317bp) protein (439aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKU4_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL87835.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_expt_500_p_scaffold_584_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19119..20378
DNA (1260bp) protein (420aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKU3_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL87834.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_expt_500_p_scaffold_584_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20543..21868
DNA (1326bp) protein (442aa)
ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ75_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX12151.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
SCNpilot_expt_500_p_scaffold_584_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21880..23097
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKT7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87828.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_expt_500_p_scaffold_584_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23144..24436
DNA (1293bp) protein (431aa)
ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKU2_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL87833.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
SCNpilot_expt_500_p_scaffold_584_27
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24456..25679
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035F3257 rbh
ABC transporter permease {ECO:0000313|EMBL:AJC46051.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
ABC transporter permease
SCNpilot_expt_500_p_scaffold_584_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25705..27054
DNA (1350bp) protein (450aa)
ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKT4_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL87825.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCNpilot_expt_500_p_scaffold_584_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27051..28268
DNA (1218bp) protein (406aa)
ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKT3_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL87824.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ybjZ; ABC transporter permease
SCNpilot_expt_500_p_scaffold_584_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28333..29640
DNA (1308bp) protein (436aa)
ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL9_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL99660.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type antimicrobial peptide transport system, permease component
Displaying items 1-30 of 38 in total

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