name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_978_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
348..1628
|
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
seryl-tRNA synthetase n=1 Tax=Dyella japonica RepID=UPI0002F5E1BB
rbh
|
|
SCNpilot_expt_500_p_scaffold_978_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1625..2002
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W0L9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93010.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_978_3
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2443..3045
|
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPI0_DESBD
Uncharacterized protein {ECO:0000313|EMBL:KFN46425.1}; Flags: Fragment;; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_978_4
unknown
|
Not on your lists |
3334..3834
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_978_5
unknown
|
Not on your lists |
comp(4084..4455)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_978_6
unknown
|
Not on your lists |
comp(4686..5111)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_978_7
unknown
|
Not on your lists |
comp(5182..5538)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_978_8
Snodgrassella alvi, Snodgrassella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6157..7245
|
putative alcohol dehydrogenase, zinc-containing (EC:1.1.1.-); K00001 alcohol dehydrogenase [EC:1.1.1.1]
rbh
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8KK57_PSEAI
rbh
Threonine dehydrogenase and related Zn-dependent dehydrogenase {ECO:0000313|EMBL:AHN28942.1}; TaxID=1196094 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" source="Snodgrassella alvi wkB2.;"
|
|
SCNpilot_expt_500_p_scaffold_978_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7332..7832)
|
N-acetyltransferase GCN5; K03824 putative acetyltransferase [EC:2.3.1.-]
GCN5-related N-acetyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAS8_STAND
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADH90945.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
SCNpilot_expt_500_p_scaffold_978_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8095..8343)
|
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTV0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90641.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_978_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8398..8583)
|
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037FEFC0
CsbD-like protein {ECO:0000313|EMBL:EIM03969.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_978_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8955..12191)
|
TonB-dependent receptor n=1 Tax=Rhodanobacter sp. 115 RepID=I4W586_9GAMM
rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL94627.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent receptor
rbh
|
|
SCNpilot_expt_500_p_scaffold_978_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12249..14810)
|
glycoside hydrolase family protein; K01188 beta-glucosidase [EC:3.2.1.21]
Glycoside hydrolase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4F1_9GAMM
Glycoside hydrolase family protein {ECO:0000313|EMBL:EIL94342.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
|
|
SCNpilot_expt_500_p_scaffold_978_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15014..16027
|
LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL3_9GAMM
rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL91604.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
|
|
SCNpilot_expt_500_p_scaffold_978_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16133..17476
|
Major facilitator superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W584_9GAMM
rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL94625.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
major facilitator superfamily protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_978_16
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17597..19897)
|
Nitric oxide reductase n=1 Tax=Burkholderia sp. H160 RepID=B5WCL6_9BURK
rbh
Nitric oxide reductase {ECO:0000313|EMBL:EEA03904.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
|
|
SCNpilot_expt_500_p_scaffold_978_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20152..21549
|
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Coproporphyrinogen-III oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU2_9GAMM
oxygen-independent coproporphyrinogen III oxidase
|
|
SCNpilot_expt_500_p_scaffold_978_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21546..22337
|
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WYI0_9GAMM
cAMP-binding protein
cAMP-binding protein {ECO:0000313|EMBL:AGG89998.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_978_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22420..22971
|
Cytochrome B561 n=1 Tax=Rhodanobacter denitrificans RepID=M4NIN0_9GAMM
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:AGG89952.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_978_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23180..24538
|
Major anaerobically induced outer membrane transmembrane protein (Fragment) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGC1_9GAMM
dissimilatory nitrite reductase (NO-forming), copper type apoprotein
Major anaerobically induced outer membrane transmembrane protein {ECO:0000313|EMBL:EIL98512.1}; Flags: Fragment;; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_expt_500_p_scaffold_978_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24540..25298
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGC2_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98513.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_978_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25435..26001
|
SCO1/SenC family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGC3_9GAMM
SCO1/SenC family protein {ECO:0000313|EMBL:EIL98514.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
|
|
SCNpilot_expt_500_p_scaffold_978_23 |
Not on your lists |
26113..27432
|
Outer membrane porin (Fragment) n=2 Tax=mine drainage metagenome RepID=T1AS82_9ZZZZ
rbh
Outer membrane porin {ECO:0000313|EMBL:EQD63431.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_978_24
unknown
|
Not on your lists |
27558..27752
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036B0E50
|
|
SCNpilot_expt_500_p_scaffold_978_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27733..28977
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BCD77
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89994.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_p_scaffold_978_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28988..29377
|
DGC domain containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL0_9GAMM
DGC domain containing protein {ECO:0000313|EMBL:EIL96501.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_978_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29367..30206
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N4_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93025.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_978_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30250..31275
|
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL1_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_p_scaffold_978_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31272..32717
|
L-aspartate oxidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYI7_9GAMM
L-aspartate oxidase {ECO:0000313|EMBL:EIL96503.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate oxidase
|
|
SCNpilot_expt_500_p_scaffold_978_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32843..33358
|
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA (EC:4.2.1.59)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobact
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL3_9GAMM
|
Name | Ratio |
---|---|
Rhodanobacter | 70.45% |
unknown | 15.91% |
Dyella | 4.55% |
Starkeya | 2.27% |
Snodgrassella | 2.27% |
Burkholderia | 2.27% |
Arenimonas | 2.27% |