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SCNpilot_expt_500_p_scaffold_385_14

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: 10295..11572

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Rhodanobacter denitrificans RepID=M4NKW7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 425.0
  • Bit_score: 609
  • Evalue 2.50e-171
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 425.0
  • Bit_score: 609
  • Evalue 8.00e-172
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:AGG88406.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 425.0
  • Bit_score: 609
  • Evalue 3.60e-171

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGACGGCGACCGACACCCACCGCAGAATCGAAGCCATCTGGCGGATCGAATCGGCACGGATCATCGCCGGGCTCGCGCGCATGCTGCGCGACGTGGGCCTGGCGGAGGAACTGGCGCAGGACGCGCTGGTGACCGCGCTGGAGCAATGGCCGCAGGCCGGCGTGCCGGACAACCCCGGGGCCTGGCTGATGACCACGGCGAAGCACCGCGCGATCGACCGCCTGCGCCGCCATCAGCTGATGGAGCGCAAGCACGAGGAAATCGCCCGCGAGCTGGAAGCGGAGCAAGCCGATGCCATGCCTCGCCTCGACGACATGCTTGACGACGACATCGGCGACGACCTGCTGCGGCTGATCTTCACCGCCTGCCACCCCGCGCTGCCTCCCGAGTCGCGGGTGGCGCTCACCTTGCGCATGCTCGGCGGCCTCAGCACGGTCGAGATCGCCCGAGCCTTCCTGCAGCCGGAACCCACCGTGGCGCAGCGCATCGTGCGCGCCAAGCGCACCCTGGGCGAGAAAAAGGTGCCGTTCGAGGTACCGCGCGGCGACGAGCTGGCCGAACGGCTGGACGCCGTGCTGGGCGTGATCTACCTCGTCTTCAACGAGGGCTATACCGCCACCGCCGGCGACGACTGGATGCGCCCCGTCCTGTGCGAGGAGGCGCTGCGCCTGGGCCGCATCCTGGCCGGCCTGATGCCGCAGCAGGCGCCGGTGTTCGGCCTGCTCGCGCTGATGGAGCTGCAGGCCTCGCGCGCCCACGCACGCAGCGGCCCGGACGGCGAACCGATCCGCCTGCTGGAACAGAACCGCGCGCGCTGGGACCGGCTGCTGATCCAGCGCGGCCTCGCCGCGCTGGAACGCGCGCGCCAGCTCGGCGGCGACGCGGAGCCCTACACCTTGCAGGCCGCGATCGCCGCCTGCCACGCCCGCGCGCCCACCGCGGAGCAGACCGACTGGAACCGCATCGCCGCGCTGTACGCCACGCTCGCCGCCGTCGCCCCGTCGCCGGTGGTGGAGCTCAATCGTGCCGTGGCGGTCGGGATGGCCAACGGACCGGCCGCCGGCCTCGCCCTGGTCGACACGCTGCGCGACGAGCCGGTGCTGGCGAACTACCACCTGCTGCCCGCCGTGCGCGGCGACCTGCTGGAAAAACTCGGTCGCCACGACGAAGCCGGCACCGAGTTCGGACGCGCCGCCGCGCTCACCCGCAACACGCGCGAGCGCGACCTGCTGCAGGCCCGCGCCGCGGCCTGCGCGAAACACGACTCGACCGGCTGA
PROTEIN sequence
Length: 426
MTATDTHRRIEAIWRIESARIIAGLARMLRDVGLAEELAQDALVTALEQWPQAGVPDNPGAWLMTTAKHRAIDRLRRHQLMERKHEEIARELEAEQADAMPRLDDMLDDDIGDDLLRLIFTACHPALPPESRVALTLRMLGGLSTVEIARAFLQPEPTVAQRIVRAKRTLGEKKVPFEVPRGDELAERLDAVLGVIYLVFNEGYTATAGDDWMRPVLCEEALRLGRILAGLMPQQAPVFGLLALMELQASRAHARSGPDGEPIRLLEQNRARWDRLLIQRGLAALERARQLGGDAEPYTLQAAIAACHARAPTAEQTDWNRIAALYATLAAVAPSPVVELNRAVAVGMANGPAAGLALVDTLRDEPVLANYHLLPAVRGDLLEKLGRHDEAGTEFGRAAALTRNTRERDLLQARAAACAKHDSTG*