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SCNpilot_expt_500_p_scaffold_1044

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1044_1
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..107)
DNA (105bp) protein (35aa)
Elongation factor G n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF68_MICTS
elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=596312 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus SK58.;"
SCNpilot_expt_500_p_scaffold_1044_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(195..665)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B4E006 rbh
rpsG; ribosomal protein S7; K02992 small subunit ribosomal protein S7 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(671..1039)
DNA (369bp) protein (123aa)
30S ribosomal protein S12 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF70_MICTS
rpsL; ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1335..2087)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003465FD5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73925.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2084..3517)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B349A rbh
FHA domain rbh
FOG: FHA domain {ECO:0000313|EMBL:BAJ73926.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3514..6009)
DNA (2496bp) protein (832aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DE88D rbh
transglutaminase-like enzyme, cysteine protease rbh
Transglutaminase-like enzyme, putative cysteine protease {ECO:0000313|EMBL:BAJ73927.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6006..7382)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348BB18 rbh
hypothetical protein rbh
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ73928.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_8
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7427..8392)
DNA (966bp) protein (322aa)
MoxR-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase AAA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A5D62 rbh
ATPase {ECO:0000313|EMBL:KEP75818.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_500_p_scaffold_1044_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8421..14387)
DNA (5967bp) protein (1989aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF76_MICTS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73930.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14384..15520)
DNA (1137bp) protein (379aa)
serine/threonine protein kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345738C rbh
serine/threonine protein kinase rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:BAJ73931.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15622..16284)
DNA (663bp) protein (221aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B584B rbh
spermidine/putrescine-binding periplasmic protein rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:BAJ73932.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16338..16823)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003453C1A
hypothetical protein
Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains {ECO:0000313|EMBL:BAJ73933.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16835..17887)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3A9ED rbh
ABC transporter rbh
ABC-type transport system {ECO:0000313|EMBL:BAJ73934.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_14
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18015..18611
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B4508F
Uncharacterized protein {ECO:0000313|EMBL:KEP74096.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
glutamine cyclotransferase
SCNpilot_expt_500_p_scaffold_1044_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18647..19246)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B4FED9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73937.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1044_16
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19420..23178)
DNA (3759bp) protein (1253aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'''', partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B69A12
SCNpilot_expt_500_p_scaffold_1044_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23220..23381)
DNA (162bp) protein (54aa)
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF85_MICTS
SCNpilot_expt_500_p_scaffold_1044_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23378..25567)
DNA (2190bp) protein (730aa)
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF85_MICTS
Displaying 18 items

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