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SCNpilot_expt_500_p_scaffold_1165

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1165_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1302)
DNA (1302bp) protein (434aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
DNA ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA35_MICTS rbh
SCNpilot_expt_500_p_scaffold_1165_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1579..3222
DNA (1644bp) protein (548aa)
superfamily II DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] rbh
ATP-dependent DNA helicase RecQ n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B51569 rbh
Superfamily II DNA helicase {ECO:0000313|EMBL:BAJ75864.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3338..3742)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA33_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ75863.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3782..4558)
DNA (777bp) protein (259aa)
oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B64B96 rbh
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase rbh
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ75858.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4555..5436)
DNA (882bp) protein (294aa)
oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B33479 rbh
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase rbh
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ75857.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5648..8176)
DNA (2529bp) protein (843aa)
ATPase AAA n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B2FC98 rbh
ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC rbh
ATPase with chaperone activity, ATP-binding subunit {ECO:0000313|EMBL:BAJ75856.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8275..9117)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B73CDA rbh
periplasmic serine protease rbh
Periplasmic serine protease {ECO:0000313|EMBL:BAJ75854.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9178..9942
DNA (765bp) protein (255aa)
hypothetical protein, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B43C39 rbh
hypothetical protein; K06203 CysZ protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ75847.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9968..10117
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA16_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ75846.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10138..11238
DNA (1101bp) protein (367aa)
16S RNA G1207 methylase RsmC; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] rbh
16S RNA G1207 methylase RsmC n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA14_MICTS rbh
16S RNA G1207 methylase RsmC {ECO:0000313|EMBL:BAJ75844.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_11
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11242..11706)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA13_MICTS
Membrane protein {ECO:0000313|EMBL:KEP74274.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1165_12
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12047..13069
DNA (1023bp) protein (341aa)
Predicted membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA11_MICTS rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP74272.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_1165_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13088..13933
DNA (846bp) protein (282aa)
sugar kinase, ribokinase family; K00852 ribokinase [EC:2.7.1.15] rbh
ribokinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000346AE8C rbh
Sugar kinase, ribokinase family {ECO:0000313|EMBL:BAJ75838.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13930..14856
DNA (927bp) protein (309aa)
nucleoside hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349559F rbh
inosine-uridine nucleoside N-ribohydrolase rbh
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:BAJ75837.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_15
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14930..15106
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QFA0_CATAD
Uncharacterized protein {ECO:0000313|EMBL:AJT40957.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
hypothetical protein; K09946 hypothetical protein
SCNpilot_expt_500_p_scaffold_1165_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15169..16143)
DNA (975bp) protein (325aa)
nrdF; ribonucleotide reductase, beta subunit; K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Microbacterium sp. B19 RepID=UPI0003468381 rbh
SCNpilot_expt_500_p_scaffold_1165_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16176..18332)
DNA (2157bp) protein (719aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
ribonucleotide reductase, alpha subunit; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9X5_MICTS rbh
SCNpilot_expt_500_p_scaffold_1165_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18320..18754)
DNA (435bp) protein (145aa)
ribonucleotide reductase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AF21B
hypothetical protein; K03647 protein involved in ribonucleotide reduction
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1165_19
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18779..19012)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000349607C
Glutaredoxin {ECO:0000313|EMBL:KEP72672.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
nrdH; glutaredoxin; K06191 glutaredoxin-like protein NrdH
SCNpilot_expt_500_p_scaffold_1165_20
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19398..20528
DNA (1131bp) protein (377aa)
major facilitator transporter, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B4AFDD rbh
Major facilitator transporter {ECO:0000313|EMBL:KEP74264.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
permease of the major facilitator superfamily rbh
Displaying 20 items

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