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SCNpilot_expt_500_p_scaffold_1705

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1705_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..429
DNA (429bp) protein (143aa)
Transposase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8K8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL36678.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transposase
SCNpilot_expt_500_p_scaffold_1705_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

371..943
DNA (573bp) protein (191aa)
Transposase IS4 family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8K7_9MICO rbh
Transposase IS4 family protein {ECO:0000313|EMBL:EIC06723.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transposase for insertion sequence element
SCNpilot_expt_500_p_scaffold_1705_3
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(940..1533)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=2 Tax=Corynebacterium equii RepID=E9T4J7_COREQ
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGD22869.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
Transcriptional regulator
SCNpilot_expt_500_p_scaffold_1705_4
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1610..2551
DNA (942bp) protein (314aa)
Oxidoreductase, aldo/keto reductase family protein n=3 Tax=Corynebacterium equii RepID=E9T4J6_COREQ rbh
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EGD22868.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
Aldo-keto reductase rbh
SCNpilot_expt_500_p_scaffold_1705_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2707..3708
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FD541D rbh
DNA repair ATPase {ECO:0000313|EMBL:AHG87747.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA repair ATPase
SCNpilot_expt_500_p_scaffold_1705_6
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3942..4151)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A7EA9
Uncharacterized protein {ECO:0000313|EMBL:KEP72900.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1705_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4495..4740)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000377C2D1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ85552.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_500_p_scaffold_1705_8
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4843..5742
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RF70_9ACTO
LysR family transcriptional regulator {ECO:0000313|EMBL:KHL16530.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
LysR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_1705_9
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5893..6450
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HL32_MYCMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC42008.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
SCNpilot_expt_500_p_scaffold_1705_10
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6447..7289
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XE29_MICPN rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH77523.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_1705_11
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7344..7844)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND47_MICTS
Small multidrug efflux protein {ECO:0000313|EMBL:KEP76311.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1705_12
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7989..8651)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PWH9_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB33448.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_expt_500_p_scaffold_1705_13
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8648..9295)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034B237B
Uncharacterized protein {ECO:0000313|EMBL:KJQ52693.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1705_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9354..10586
DNA (1233bp) protein (411aa)
signal transduction histidine kinase; K07778 two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] rbh
Signal transduction histidine kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND46_MICTS rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:BAJ73685.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1705_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10583..11185
DNA (603bp) protein (201aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND45_MICTS rbh
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; K07693 two-component system, NarL family, response regulator DesR rbh
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAJ73684.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1705_16
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11256..11933
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348D2E2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH67215.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
SCNpilot_expt_500_p_scaffold_1705_17
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11950..12843
DNA (894bp) protein (298aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7I1_SACES
alpha/beta hydrolase fold containing protein
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:CCH32849.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_expt_500_p_scaffold_1705_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13305..13580
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KEP76309.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_500_p_scaffold_1705_19
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13776..14108
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003491EBE
Uncharacterized protein {ECO:0000313|EMBL:KEP76316.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_500_p_scaffold_1705_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14131..14736)
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDN1_MICTS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ73707.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1705_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14703..15317)
DNA (615bp) protein (205aa)
Predicted flavoprotein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDN0_MICTS rbh
flavoprotein rbh
Predicted flavoprotein {ECO:0000313|EMBL:BAJ73706.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1705_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15433..15918
DNA (486bp) protein (162aa)
Cytosine/adenosine deaminase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND50_MICTS
cytosine/adenosine deaminase
Cytosine/adenosine deaminase {ECO:0000313|EMBL:BAJ73689.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1705_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15915..16232
DNA (318bp) protein (106aa)
Biotin carboxyl carrier protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND55_MICTS
biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:BAJ73694.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1705_24
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16257..17498)
DNA (1242bp) protein (414aa)
Putative oxidoreductase n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6WNK2_9ACTO rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94138.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
Displaying 24 items

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