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SCNpilot_expt_500_p_scaffold_1912

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1912_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..394
DNA (393bp) protein (131aa)
Elongation factor Ts n=2 Tax=Microbacterium RepID=H8E4G8_9MICO
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
tsf; translation elongation factor Ts; K02357 elongation factor Ts
SCNpilot_expt_500_p_scaffold_1912_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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485..1204
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] rbh
uridylate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003486192 rbh
SCNpilot_expt_500_p_scaffold_1912_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1279..1833
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDH5_MICTS rbh
frr; ribosome recycling factor; K02838 ribosome recycling factor rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1912_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1837..2886
DNA (1050bp) protein (350aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
CDP-diglyceride synthetase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] rbh
CDP-diglyceride synthetase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349DA52 rbh
SCNpilot_expt_500_p_scaffold_1912_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2883..3449
DNA (567bp) protein (189aa)
MFS transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034619AF rbh
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ76243.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1912_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3497..4207
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000346C7F5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76244.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1912_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4215..4502
DNA (288bp) protein (96aa)
ATP/GTP-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D4576
ATP/GTP-binding protein
ATP/GTP-binding protein {ECO:0000313|EMBL:BAJ76245.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1912_8
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4502..5224
DNA (723bp) protein (241aa)
alpha/beta hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A3C14 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KEP76280.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hydrolase of the alpha/beta superfamily; K07018 rbh
SCNpilot_expt_500_p_scaffold_1912_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5228..6301)
DNA (1074bp) protein (358aa)
permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B80AB rbh
permease rbh
Predicted permease {ECO:0000313|EMBL:BAJ76247.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1912_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6463..8277
DNA (1815bp) protein (605aa)
Glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDI2_MICTS rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:BAJ76248.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1912_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8274..9221
DNA (948bp) protein (316aa)
thioredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI00034934FD rbh
thioredoxin domain-containing protein; K05838 putative thioredoxin rbh
Thioredoxin domain-containing protein {ECO:0000313|EMBL:BAJ76249.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_1912_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9274..11412)
DNA (2139bp) protein (713aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
1,4-alpha-glucan branching enzyme; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] rbh
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDI4_MICTS rbh
SCNpilot_expt_500_p_scaffold_1912_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11409..13493)
DNA (2085bp) protein (695aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034ACABD rbh
glycosidase rbh
SCNpilot_expt_500_p_scaffold_1912_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13578..13973)
DNA (396bp) protein (132aa)
type II secretory pathway, pullulanase PulA; K02438 glycogen operon protein GlgX [EC:3.2.1.-]
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycosyl hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6DDB6
Displaying 14 items

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