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SCNpilot_expt_500_p_scaffold_170

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Displaying items 1-30 of 93 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_170_1
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..548)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345E8AA
Strain 70137, complete genome {ECO:0000313|EMBL:AJM78191.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
Ni,Fe-hydrogenase III small subunit
SCNpilot_expt_500_p_scaffold_170_2
unknown

Not on your lists

comp(1316..1678)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_170_3
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1764..2777
DNA (1014bp) protein (338aa)
LacI family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000348152F rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KEP74996.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator rbh
SCNpilot_expt_500_p_scaffold_170_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2889..3476
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B531C6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP74997.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
DnaJ-class molecular chaperone
SCNpilot_expt_500_p_scaffold_170_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3488..4819)
DNA (1332bp) protein (444aa)
sodium:proton antiporter, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B7667D rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
nhaA; Na+/H+ antiporter; K03313 Na+:H+ antiporter, NhaA family rbh
SCNpilot_expt_500_p_scaffold_170_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5081..6418)
DNA (1338bp) protein (446aa)
Xanthine/uracil permease n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L8_MICTS rbh
ycdG; xanthine/uracil permease rbh
Xanthine/uracil permease {ECO:0000313|EMBL:BAJ74166.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6575..7564)
DNA (990bp) protein (330aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L7_MICTS rbh
SCNpilot_expt_500_p_scaffold_170_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7624..9321
DNA (1698bp) protein (566aa)
Choline-glycine betaine transporter n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L6_MICTS rbh
choline-glycine betaine transporter; K02168 high-affinity choline transport protein rbh
Choline-glycine betaine transporter {ECO:0000313|EMBL:BAJ74164.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_9
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9507..10130
DNA (624bp) protein (208aa)
Predicted transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L5_MICTS rbh
Transcriptional regulator {ECO:0000313|EMBL:KEP74999.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator rbh
SCNpilot_expt_500_p_scaffold_170_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10127..11758
DNA (1632bp) protein (544aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L4_MICTS rbh
permease of the major facilitator superfamily rbh
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ74162.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11806..12126)
DNA (321bp) protein (107aa)
RNA methyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6519C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74150.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12201..13472)
DNA (1272bp) protein (424aa)
purD; phosphoribosylamine-glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
phosphoribosylamine--glycine ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345420C rbh
SCNpilot_expt_500_p_scaffold_170_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13630..13986
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6BE99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74148.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14079..14414
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C8FEC
trk-type K+ transport systems, membrane components
Trk-type K+ transport systems, membrane components {ECO:0000313|EMBL:BAJ74147.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14425..15036)
DNA (612bp) protein (204aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI000348F318 rbh
Zinc-dependent alcohol dehydrogenase {ECO:0000313|EMBL:KEP74401.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
Zn-dependent alcohol dehydrogenase rbh
SCNpilot_expt_500_p_scaffold_170_16
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15643..16119
DNA (477bp) protein (159aa)
DNA helicase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B597EF
Uncharacterized protein {ECO:0000313|EMBL:KJQ53476.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_expt_500_p_scaffold_170_17
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16274..17416
DNA (1143bp) protein (381aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
purM; phosphoribosylaminoimidazole (AIR) synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6J5_MICTS rbh
SCNpilot_expt_500_p_scaffold_170_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17423..18889
DNA (1467bp) protein (489aa)
purF; glutamine phosphoribosylpyrophosphate amidotransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] rbh
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (st
amidophosphoribosyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A5450 rbh
SCNpilot_expt_500_p_scaffold_170_19
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18913..20103
DNA (1191bp) protein (397aa)
cyanate permease n=1 Tax=Microbacterium sp. B19 RepID=UPI000347308C rbh
ABC transporter permease {ECO:0000313|EMBL:KEP74399.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
cyanate permease; K03449 MFS transporter, CP family, cyanate transporter rbh
SCNpilot_expt_500_p_scaffold_170_20
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20110..20292)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AF587
Uncharacterized protein {ECO:0000313|EMBL:KEP74394.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_170_21
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20455..20970
DNA (516bp) protein (172aa)
universal stress protein UspA n=1 Tax=Microbacterium sp. B19 RepID=UPI000345D189
Universal stress protein UspA {ECO:0000313|EMBL:KEP74393.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
universal stress protein UspA
SCNpilot_expt_500_p_scaffold_170_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20974..21579)
DNA (606bp) protein (202aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D1251 rbh
transcriptional regulator rbh
Predicted transcriptional regulator {ECO:0000313|EMBL:BAJ74138.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21579..22424)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DDD2D rbh
hypothetical protein rbh
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ74137.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22751..22915)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345F60F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74136.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_25
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23135..23404
DNA (270bp) protein (90aa)
Plasmid stabilization system protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6I7_MICTS
Rho termination factor {ECO:0000313|EMBL:KEP74451.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
plasmid stabilization system protein
SCNpilot_expt_500_p_scaffold_170_26
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23407..24372
DNA (966bp) protein (322aa)
topoisomerase I n=1 Tax=Microbacterium sp. B19 RepID=UPI000348F2AD rbh
Topoisomerase I {ECO:0000313|EMBL:KEP74450.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
topoisomerase IB rbh
SCNpilot_expt_500_p_scaffold_170_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24374..24652)
DNA (279bp) protein (93aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND54_MICTS
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ73693.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_170_28
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24649..26325)
DNA (1677bp) protein (559aa)
putative NADH oxidase; K00359 NADH oxidase [EC:1.6.-.-] rbh
Putative NADH oxidase {ECO:0000313|EMBL:CAN00097.1}; EC=1.6.-.- {ECO:0000313|EMBL:CAN00097.1};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Putative NADH oxidase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CM13_CLAM3 rbh
SCNpilot_expt_500_p_scaffold_170_29
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26322..26483)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7G5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53001.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_170_30
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26576..26947
DNA (372bp) protein (124aa)
membrane protein involved in chromosome condensation n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B4DD2E
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
integral membrane protein possibly; K06199 CrcB protein
Displaying items 1-30 of 93 in total

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