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SCNpilot_expt_500_p_scaffold_938

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_938_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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589..1851
DNA (1263bp) protein (421aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6P4_MICTS rbh
sugar ABC transporter periplasmic protein; K10188 lactose/L-arabinose transport system substrate-binding protein rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:BAJ75408.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1856..2803
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B40D0F rbh
sugar ABC transporter permease; K10189 lactose/L-arabinose transport system permease protein rbh
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:BAJ75409.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2815..3708
DNA (894bp) protein (298aa)
ABC-type sugar transport system, permease component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6P6_MICTS rbh
sugar ABC transporter permease; K10190 lactose/L-arabinose transport system permease protein rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:BAJ75410.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3734..5614
DNA (1881bp) protein (627aa)
beta-glucosidase-related glycosidase; K05349 beta-glucosidase [EC:3.2.1.21] rbh
beta-glucosidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BDD4A rbh
Beta-glucosidase-related glycosidase {ECO:0000313|EMBL:BAJ75411.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5611..6744
DNA (1134bp) protein (378aa)
LacI family transcription regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CAB22 rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAJ75412.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6890..8461)
DNA (1572bp) protein (524aa)
polyketide synthase regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034649FF rbh
Polyketide synthase regulator {ECO:0000313|EMBL:KHK98952.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
regulator of polyketide synthase expression; K09684 purine catabolism regulatory protein rbh
SCNpilot_expt_500_p_scaffold_938_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8470..9864
DNA (1395bp) protein (465aa)
gabT; 4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] rbh
4-aminobutyrate aminotransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034812F0 rbh
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:BAJ75421.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9955..11415
DNA (1461bp) protein (487aa)
monoamine oxidase; K03343 putrescine oxidase [EC:1.4.3.10] rbh
Monoamine oxidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6Q8_MICTS rbh
Monoamine oxidase {ECO:0000313|EMBL:BAJ75422.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11412..12311
DNA (900bp) protein (300aa)
universal stress protein UspA n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B403D0 rbh
universal stress protein UspA rbh
Universal stress protein UspA {ECO:0000313|EMBL:BAJ75423.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12308..13858
DNA (1551bp) protein (517aa)
Large neutral amino acids transporter small subunit 2 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AF2C9 rbh
amino acid transporters rbh
Amino acid transporters {ECO:0000313|EMBL:BAJ75424.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13900..15261
DNA (1362bp) protein (454aa)
NAD-dependent aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
succinate-semialdehyde dehdyrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B6CB3 rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAJ75425.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_12
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15550..15825
DNA (276bp) protein (92aa)
preprotein translocase subunit SecE n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D1497
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
SCNpilot_expt_500_p_scaffold_938_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15887..17008
DNA (1122bp) protein (374aa)
transcription antitermination factor NusG n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BB60F rbh
nusG; transcription antiterminator; K02601 transcriptional antiterminator NusG rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17204..18157)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003476F3E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ75430.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18492..18923
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6R7_MICTS
rplK; ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_16
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18935..19627
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D7A2B rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1 rbh
SCNpilot_expt_500_p_scaffold_938_17
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19799..20602
DNA (804bp) protein (268aa)
L-cystine-binding protein tcyA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C8512 rbh
Polar amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEP74164.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
tcyA; amino acid ABC transporter periplasmic protein; K02424 cystine transport system substrate-binding protein rbh
SCNpilot_expt_500_p_scaffold_938_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20680..21345
DNA (666bp) protein (222aa)
cysteine ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A412D rbh
amino acid ABC transporter permease; K10009 cystine transport system permease protein rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KEP74165.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_500_p_scaffold_938_19
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21332..22123
DNA (792bp) protein (264aa)
polar amino acid ABC transporter ATPase; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
arginine ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BE08B rbh
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEP74166.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_500_p_scaffold_938_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22126..23178
DNA (1053bp) protein (351aa)
dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] rbh
2-nitropropane dioxygenase n=1 Tax=Microbacterium sp. B19 RepID=UPI000346623B rbh
Dioxygenase {ECO:0000313|EMBL:BAJ75436.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_938_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23175..23462)
DNA (288bp) protein (96aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
acylphosphatase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C3468
SCNpilot_expt_500_p_scaffold_938_22
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23470..24129)
DNA (660bp) protein (220aa)
amino acid transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B2181 rbh
Amino acid transporter {ECO:0000313|EMBL:KEP74800.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
lysine efflux permease; K06895 L-lysine exporter family protein LysE/ArgO rbh
SCNpilot_expt_500_p_scaffold_938_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24199..24879
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6S5_MICTS rbh
transcriptional regulator; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor rbh
Transcriptional regulator {ECO:0000313|EMBL:BAJ75439.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying 23 items

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