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SCNpilot_expt_500_p_scaffold_2068

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2068_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..598
DNA (597bp) protein (199aa)
FOG: Ankyrin repeat n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFW8_MICTS
ankyrin repeat
FOG: Ankyrin repeat {ECO:0000313|EMBL:BAJ74013.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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972..1925
DNA (954bp) protein (318aa)
malate/lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27] rbh
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
lactate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BAAE9 rbh
SCNpilot_expt_500_p_scaffold_2068_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2087..3484
DNA (1398bp) protein (466aa)
DNA repair protein RadA n=1 Tax=Microbacterium sp. B19 RepID=UPI0003473F7B rbh
radA; ATP-dependent serine protease; K04485 DNA repair protein RadA/Sms rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3749..4159)
DNA (411bp) protein (137aa)
dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345CED5
anaerobic dehydrogenase, typically selenocysteine-containing
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:BAJ74017.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4297..5013)
DNA (717bp) protein (239aa)
GntR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A5D6B rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAJ74018.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_6
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5038..5817)
DNA (780bp) protein (260aa)
short-chain dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003457F76 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KEP74533.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
dehydrogenase with different specificities rbh
SCNpilot_expt_500_p_scaffold_2068_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5861..7216)
DNA (1356bp) protein (452aa)
aldehyde dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003498CF3 rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KEP74532.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
NAD-dependent aldehyde dehydrogenase rbh
SCNpilot_expt_500_p_scaffold_2068_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7213..7986)
DNA (774bp) protein (258aa)
Predicted glutamine amidotransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFX6_MICTS rbh
glutamine amidotransferase; K07010 putative glutamine amidotransferase rbh
Predicted glutamine amidotransferase {ECO:0000313|EMBL:BAJ74021.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7967..9322)
DNA (1356bp) protein (452aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] rbh
glutamate--ammonia ligase, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B380F9 rbh
Glutamine synthetase {ECO:0000313|EMBL:BAJ74022.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9470..11002
DNA (1533bp) protein (511aa)
amino acid ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BC37A rbh
amino acid transporters rbh
Amino acid transporters {ECO:0000313|EMBL:BAJ74023.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11100..11795)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5B72D rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ74024.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11803..12345)
DNA (543bp) protein (181aa)
N-acetylglutamate synthase; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] rbh
N-acetylglutamate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344DF11 rbh
N-acetylglutamate synthase {ECO:0000313|EMBL:BAJ74025.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_p_scaffold_2068_13
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12375..13844)
DNA (1470bp) protein (490aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003483495
NDP-hexose 4-ketoreductase {ECO:0000313|EMBL:KEP74527.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
clpC; ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
Displaying 13 items

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