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SCNpilot_expt_500_p_scaffold_1744

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1744_1
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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114..368
DNA (255bp) protein (85aa)
IstB domain-containing protein ATP-binding protein n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3EJI6_9ACTO
IstB domain-containing protein ATP-binding protein {ECO:0000313|EMBL:EMF56536.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
istB-like ATP binding protein
SCNpilot_expt_500_p_scaffold_1744_2
R_RIF_OD1_01_42_19, RIF-OD1-1, Parcubacteria, Bacteria

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485..1351
DNA (867bp) protein (289aa)
Transposase n=4 Tax=environmental samples RepID=Q648U4_9ARCH id=67861 bin=ACD48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
transposase, IS4 family protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_01_42_19_curated
SCNpilot_expt_500_p_scaffold_1744_3
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1452..1988
DNA (537bp) protein (179aa)
IstB-like ATP binding protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LU30_SYNAS
istB-like ATP binding protein
IstB-like ATP binding protein {ECO:0000313|EMBL:ABC77590.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
SCNpilot_expt_500_p_scaffold_1744_4

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comp(2360..3901)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YSK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD46030.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ISAfe4, transposase orf3
SCNpilot_expt_500_p_scaffold_1744_5

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comp(3955..4308)
DNA (354bp) protein (118aa)
Transposase, IS66 family n=1 Tax=uncultured bacterium RepID=K2BNG8_9BACT
Transposase, IS66 family {ECO:0000313|EMBL:EKD75091.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
SCNpilot_expt_500_p_scaffold_1744_6
unknown

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comp(4308..4652)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1744_7
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4715..5218
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9R2_PARUW
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
SCNpilot_expt_500_p_scaffold_1744_8
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5421..5738
DNA (318bp) protein (106aa)
pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000255|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000255|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PCD {ECO:0000255|HAMAP-Rule:MF_00434};; TaxID=336407 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;
Putative pterin-4-alpha-carbinolamine dehydratase n=2 Tax=Rickettsia bellii RepID=PHS_RICB8
SCNpilot_expt_500_p_scaffold_1744_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5735..6400
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GJU1_LAWIN
Membrane protein {ECO:0000313|EMBL:AIL12642.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1744_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6575..8293)
DNA (1719bp) protein (573aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2FH01_9BACT
conjugative transfer protein TraD
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_p_scaffold_1744_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8349..8930
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12609.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1744_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8890..11673)
DNA (2784bp) protein (928aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF7D
Uncharacterized protein {ECO:0000313|EMBL:AIL13435.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
traG; conjugative transfer protein traG; K12056 conjugal transfer mating pair stabilization protein TraG rbh
SCNpilot_expt_500_p_scaffold_1744_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11680..13053)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACEB rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL12611.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
protein TraH; K12072 conjugative transfer pilus assembly protein TraH
SCNpilot_expt_500_p_scaffold_1744_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13050..13835)
DNA (786bp) protein (262aa)
TraF-like protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACEA
Uncharacterized protein {ECO:0000313|EMBL:AIL12612.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
protein TraF; K12057 conjugal transfer pilus assembly protein TraF
SCNpilot_expt_500_p_scaffold_1744_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13870..14100
DNA (231bp) protein (77aa)
Ribbon-helix-helix , copG family protein n=3 Tax=Haemophilus parasuis RepID=U4RLJ1_HAEPR
Uncharacterized protein {ECO:0000313|EMBL:AIL12613.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
CopG-like DNA-binding protein
SCNpilot_expt_500_p_scaffold_1744_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14087..14365
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003755AF0
Uncharacterized protein {ECO:0000313|EMBL:AIL12614.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
addiction module antitoxin; K06218 RelE protein
SCNpilot_expt_500_p_scaffold_1744_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14371..14661)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13433.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
conjugative transfer protein TraN id=4756828 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K12058 conjugal transfer mating pair stabilization protein TraN
Displaying 17 items

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