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SCNpilot_expt_500_p_scaffold_2944_6

Organism: SCNPILOT_EXPT_500_P_Alphaproteobacteria_36_9_partial

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 4428..4703

Top 3 Functional Annotations

Value Algorithm Source
Bacterial nucleoid protein Hbs n=3 Tax=Pediococcus pentosaceus RepID=Q03F89_PEDPA similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 89.0
  • Bit_score: 114
  • Evalue 5.50e-23
Uncharacterized protein {ECO:0000313|EMBL:AIL12834.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 91.0
  • Bit_score: 154
  • Evalue 8.90e-35
nucleoid protein Hbs; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 89.0
  • Bit_score: 114
  • Evalue 1.70e-23

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGAATAAATCTGAATTAATTAGTGAAATTGCAAAAGTAACTGGAACAACAAAGCAAGCTTCTGAGCAGGCTCTTAATGGCGTTTTTGATTCAATTAAAGAAGTACTTCGTAAAGGTGAAGAAGTTCGCCTAACAGGTTTTGGAAGCTTTAAAGTAAATGGTAGAGCCGCTCGCGTAGGTAGAAACCCAAGAACAGGTGCAGAAATTAAAATTGCTGCAAGTAAAATTCCAGCCTTTAAGCCAAGCAAAGAGCTAAAGGATGCTGTTAATAAATAA
PROTEIN sequence
Length: 92
MNKSELISEIAKVTGTTKQASEQALNGVFDSIKEVLRKGEEVRLTGFGSFKVNGRAARVGRNPRTGAEIKIAASKIPAFKPSKELKDAVNK*