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SCNpilot_expt_500_p_scaffold_2944

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2944_1
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..351)
DNA (351bp) protein (117aa)
hypothetical protein id=24610877 bin=RAAC11 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_expt_500_p_scaffold_2944_2
unknown

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comp(507..653)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2944_3

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1020..1835
DNA (816bp) protein (272aa)
Transcription regulator n=1 Tax=uncultured bacterium RepID=K2FHW2_9BACT
Transcription regulator {ECO:0000313|EMBL:EKE10415.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcriptional regulator
SCNpilot_expt_500_p_scaffold_2944_4
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2228..4066)
DNA (1839bp) protein (613aa)
Patatin n=1 Tax=Thermincola potens (strain JR) RepID=D5X9C5_THEPJ
patatin
Patatin {ECO:0000313|EMBL:ADG83029.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
SCNpilot_expt_500_p_scaffold_2944_5
unknown

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4149..4370
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2944_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4428..4703
DNA (276bp) protein (92aa)
Bacterial nucleoid protein Hbs n=3 Tax=Pediococcus pentosaceus RepID=Q03F89_PEDPA
Uncharacterized protein {ECO:0000313|EMBL:AIL12834.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
nucleoid protein Hbs; K03530 DNA-binding protein HU-beta
SCNpilot_expt_500_p_scaffold_2944_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4782..5228)
DNA (447bp) protein (149aa)
Single-stranded DNA-binding protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXS8_PHAMO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
SCNpilot_expt_500_p_scaffold_2944_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5695..6021)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13713.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2944_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6060..6704)
DNA (645bp) protein (215aa)
Putative ParA protein n=2 Tax=Rickettsia amblyommii RepID=H8K6E0_RICAG
Uncharacterized protein {ECO:0000313|EMBL:AIL13714.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative ParA protein; K03496 chromosome partitioning protein
SCNpilot_expt_500_p_scaffold_2944_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6968..7171
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13715.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2944_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7324..8568
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XEL3_METSD
Uncharacterized protein {ECO:0000313|EMBL:AIL13716.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2944_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8597..8848
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13912.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2944_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8858..9457
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13733.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_2944_14
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9823..10566)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) RepID=Q5ZWW2_LEGPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU27059.1}; TaxID=272624 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 /; ATCC 33152 / DSM 7513).;"
SCNpilot_expt_500_p_scaffold_2944_15
unknown

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comp(10574..10663)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2944_16
unknown

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comp(10672..10764)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 16 items

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