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SCNpilot_expt_500_p_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 129 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_137_1
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..3242
DNA (3240bp) protein (1080aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F9C58 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABO60333.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
SCNpilot_expt_500_p_scaffold_137_2
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3253..4233
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E334F9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS45692.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
SCNpilot_expt_500_p_scaffold_137_3
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4306..4692
DNA (387bp) protein (129aa)
Uncharacterized protein n=5 Tax=Pseudomonas syringae pv. actinidiae RepID=S6PHL5_PSESF
Uncharacterized protein {ECO:0000313|EMBL:KAK41849.1}; TaxID=1095103 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. actinidiae ICMP 18884.;"
SCNpilot_expt_500_p_scaffold_137_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4689..5162
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036E7B11
Uncharacterized protein {ECO:0000313|EMBL:EQL43555.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_137_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5179..5718
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=R9VH50_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN83391.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
SCNpilot_expt_500_p_scaffold_137_6
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5725..5946
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) RepID=B1JIN5_YERPY
Uncharacterized protein {ECO:0000313|EMBL:KIF02241.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_137_7
unknown

Not on your lists

5943..6212
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_137_8
unknown

Not on your lists

6223..6438
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI000369B66C
SCNpilot_expt_500_p_scaffold_137_9
Edwardsiella tarda, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6431..8431
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E8E82E rbh
TraN rbh
TraN {ECO:0000313|EMBL:ACY86405.1}; TaxID=498217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella tarda (strain EIB202).;"
SCNpilot_expt_500_p_scaffold_137_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8443..9126
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDI8_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44313.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_p_scaffold_137_11
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9155..10075
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=U8SCP5_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EGB97794.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_137_12

Not on your lists

comp(10113..10352)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI000378DF76
Uncharacterized protein {ECO:0000313|EMBL:KKN34565.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_137_13
Moraxella macacae, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10355..10972)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Moraxella macacae 0408225 RepID=L2F500_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ELA08109.1}; TaxID=1230338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella macacae 0408225.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_137_14
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11248..12969)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E3A21A rbh
putative DNA replication primase rbh
Putative DNA replication primase {ECO:0000313|EMBL:ABS45647.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
SCNpilot_expt_500_p_scaffold_137_15
unknown

Not on your lists

comp(12972..13109)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_137_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13154..15637)
DNA (2484bp) protein (828aa)
DNA topoisomerase (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2] rbh
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E590E1 rbh
SCNpilot_expt_500_p_scaffold_137_17
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15650..16087)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=R9VIR3_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN83393.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
SCNpilot_expt_500_p_scaffold_137_18
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16047..17585)
DNA (1539bp) protein (513aa)
putative DNA topoisomerase; K03168 DNA topoisomerase I [EC:5.99.1.2] rbh
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002EFD495 rbh
Putative DNA topoisomerase {ECO:0000313|EMBL:ABS45717.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
SCNpilot_expt_500_p_scaffold_137_19
unknown

Not on your lists

comp(17599..18582)
DNA (984bp) protein (328aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_137_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18593..21196)
DNA (2604bp) protein (868aa)
hypothetical protein id=12553778 bin=BDI species=Xanthomonas axonopodis genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU71845.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
putative antirestriction protein
SCNpilot_expt_500_p_scaffold_137_21
unknown

Not on your lists

comp(21214..21618)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002EF6657
SCNpilot_expt_500_p_scaffold_137_22
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21636..22181)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00036C14B9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS45696.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
SCNpilot_expt_500_p_scaffold_137_23
unknown

Not on your lists

comp(22291..23046)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002F546E0 rbh
SCNpilot_expt_500_p_scaffold_137_24
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23053..23517)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000308AC34
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA14246.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S12.;"
SCNpilot_expt_500_p_scaffold_137_25
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23534..24442)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E676BA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS45682.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
SCNpilot_expt_500_p_scaffold_137_26
unknown

Not on your lists

comp(24439..24615)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_137_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24907..25446)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIL1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62509.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_137_28
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25443..26615)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E7B1EE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN81064.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_137_29
unknown

Not on your lists

26805..27020
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00037296EA
SCNpilot_expt_500_p_scaffold_137_30
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27017..27226
DNA (210bp) protein (70aa)
hypothetical protein n=2 Tax=Xanthomonas axonopodis RepID=UPI0003719A80
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK72986.1}; TaxID=231023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida ND6.;"
Displaying items 1-30 of 129 in total

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