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SCNpilot_expt_500_p_scaffold_3620

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3620_1
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..342
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNQ5_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08221.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_expt_500_p_scaffold_3620_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(288..566)
DNA (279bp) protein (93aa)
Putative lipoprotein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL66_BORPD
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AKE73396.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_500_p_scaffold_3620_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(571..1506)
DNA (936bp) protein (312aa)
Transcriptional regulator n=8 Tax=Pseudomonas aeruginosa RepID=S0ICJ3_PSEAI rbh
bphR; transcriptional regulator rbh
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AKE69540.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_500_p_scaffold_3620_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1695..1958)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8YNM8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETD48022.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
SCNpilot_expt_500_p_scaffold_3620_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2084..2716)
DNA (633bp) protein (211aa)
Uncharacterized protein n=15 Tax=Pseudomonas aeruginosa RepID=U1FJ24_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD48021.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
putative ORF2
SCNpilot_expt_500_p_scaffold_3620_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2739..3476)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDV4_PSEAI
Membrane protein {ECO:0000313|EMBL:ETD48020.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_3620_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3651..4892)
DNA (1242bp) protein (414aa)
Outer membrane protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK07_9BURK
outer membrane protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_500_p_scaffold_3620_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4889..5191)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK08_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70980.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Protein of unknown function (DUF3240)
SCNpilot_expt_500_p_scaffold_3620_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5184..8276)
DNA (3093bp) protein (1031aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK09_9BURK rbh
heavy metal efflux pump, cobalt-zinc-cadmium rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_500_p_scaffold_3620_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8278..9087)
DNA (810bp) protein (270aa)
RND family efflux transporter, MFP subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK10_9BURK
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EHR70982.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
membrane-fusion protein
Displaying 10 items

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