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SCNpilot_expt_500_p_scaffold_152

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Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_152_1
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(284..1684)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NQB2_RALSL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBJ42242.1}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
SCNpilot_expt_500_p_scaffold_152_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2319..3623
DNA (1305bp) protein (435aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3] rbh
Sulfite reductase, dissimilatory-type alpha subunit {ECO:0000313|EMBL:AAZ97262.1}; EC=1.8.99.3 {ECO:0000313|EMBL:AAZ97262.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
sulfite reductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003786D99 rbh
SCNpilot_expt_500_p_scaffold_152_3
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3750..4463)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367634A rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG00582.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
SCNpilot_expt_500_p_scaffold_152_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4460..5032)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003613B77 rbh
hypothetical protein; K09154 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI61664.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_expt_500_p_scaffold_152_5
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5029..6432)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E4051 rbh
Uncharacterized protein {ECO:0000313|EMBL:EUC15372.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
dihydropteroate synthase DHPS rbh
SCNpilot_expt_500_p_scaffold_152_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6408..6965)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003671443 rbh
flavoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6982..7476)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000372E2FA rbh
pts; 6-pyruvoyl tetrahydropterin synthase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7481..9451)
DNA (1971bp) protein (657aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B381E rbh
Fis family GAF modulated sigma54 specific transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9759..10307
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361B264 rbh
senC; SCO2-like protein RP587; K07152
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10330..11202
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366176E rbh
hypothetical protein; K09007 hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_11
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11247..11804)
DNA (558bp) protein (186aa)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DBE9A rbh
Tax=CG_Beta_01
SCNpilot_expt_500_p_scaffold_152_12
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11801..12037)
DNA (237bp) protein (79aa)
hypothetical protein; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D7B03
NAD-dependent formate dehydrogenase subunit delta {ECO:0000313|EMBL:EGI77512.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
SCNpilot_expt_500_p_scaffold_152_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12045..12866)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F45F4 rbh
fdsC; formate dehydrogenase associated protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12853..15702)
DNA (2850bp) protein (950aa)
formate dehydrogenase, alpha subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
formate dehydrogenase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI000378890E rbh
Formate dehydrogenase {ECO:0000313|EMBL:KGI79013.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_expt_500_p_scaffold_152_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15699..17261)
DNA (1563bp) protein (521aa)
fdsB; NAD-dependent formate dehydrogenase subunit beta (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit rbh
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AB3D8 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_16
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17258..17683)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003799E38
Formate dehydrogenase {ECO:0000313|EMBL:KHD31344.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit
SCNpilot_expt_500_p_scaffold_152_17
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18115..18867)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CAB0E rbh
Uncharacterized protein {ECO:0000313|EMBL:EIZ03282.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein; K07090 rbh
SCNpilot_expt_500_p_scaffold_152_18
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19773..20351)
DNA (579bp) protein (193aa)
Gcn5-related n-acetyltransferase n=1 Tax=gamma proteobacterium HdN1 PF4_9GAMM">RepID=E1VPF4_9GAMM
gcn5-related n-acetyltransferase
Gcn5-related n-acetyltransferase {ECO:0000313|EMBL:CBL46696.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_expt_500_p_scaffold_152_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20364..20600)
DNA (237bp) protein (79aa)
hypothetical protein id=12495178 bin=THIO_HI species=Thauera sp. 27 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20584..22284)
DNA (1701bp) protein (567aa)
cysI; putative sulfite reductase (EC:1.8.1.2); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] id=12495179 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cysI; putative sulfite reductase (EC:1.8.1.2); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22508..22849)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D610F
TusE/DsrC/DsvC family sulfur relay protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23006..23980
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003773E30 rbh
cysB; transcriptional regulator CysB; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24460..25848
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003704DED rbh
selenium-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25922..26614
DNA (693bp) protein (231aa)
SCO1/SenC family protein/methylamine utilization protein MauG id=12498377 bin=THIO_MID species=Methylobacter marinus genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCO1/SenC family protein/methylamine utilization protein MauG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26611..27816
DNA (1206bp) protein (402aa)
SCO1/SenC family protein/methylamine utilization protein MauG id=12498378 bin=THIO_MID species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
SCO1/SenC family protein/methylamine utilization protein MauG rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27867..29189
DNA (1323bp) protein (441aa)
NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3] id=12494356 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase {ECO:0000313|EMBL:AAZ98173.1}; EC=1.6.99.3 {ECO:0000313|EMBL:AAZ98173.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_p_scaffold_152_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29207..29746
DNA (540bp) protein (180aa)
aldehyde-activating protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FC768 rbh
putative formaldehyde-activating enzyme
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29888..30064
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003744D2C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_152_29
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30229..31584
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376FFF7 rbh
sulfur oxidation protein, flavocytochrome c rbh
Tax=CG_Hydro_01
SCNpilot_expt_500_p_scaffold_152_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31667..32371
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C0F36 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 123 in total

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