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SCNpilot_expt_500_p_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_171_1
unknown

Not on your lists

104..523
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_171_2
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

615..1190
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RB40_9RHOO
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
SCNpilot_expt_500_p_scaffold_171_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1323..1883
DNA (561bp) protein (187aa)
RibD domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DBF7_MYXXD rbh
riboflavin biosynthesis protein RibD domain-containing protein rbh
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCNpilot_expt_500_p_scaffold_171_4
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2409..2978
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. HAL1 RepID=G4FCJ8_9GAMM
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AJY49478.1}; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. KO116.;"
cytochrome c oxidase caa3-type, assembly factor CtaG-like protein
SCNpilot_expt_500_p_scaffold_171_5
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3198..3656
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7NJ69_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS82439.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
hypothetical protein; K09796 hypothetical protein
SCNpilot_expt_500_p_scaffold_171_6
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3653..4264
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSQ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21324.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
putative Electron transport protein SCO1/SenC
SCNpilot_expt_500_p_scaffold_171_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4441..5259)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A68DD rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_8
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5475..6800)
DNA (1326bp) protein (442aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035D9F06 rbh
ABC transporter transmembrane region; K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC transporter, transmembrane region {ECO:0000313|EMBL:CAI09960.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_500_p_scaffold_171_9
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6761..7162)
DNA (402bp) protein (134aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035D9F06
ABC transporter permease and ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_500_p_scaffold_171_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7210..8082)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DB234 rbh
putative esterase of the alpha-beta hydrolase superfamily rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8345..8914)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F806C rbh
conserved hypothethical protein, Phosphatidylethanolamine-binding protein family, UPF0098
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8995..9702)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1D85 rbh
hypothetical protein; K09915 hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_p_scaffold_171_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9834..10325
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A661E
putative Signal transduction histidine kinase
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10327..10617
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381E53F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10654..11220)
DNA (567bp) protein (189aa)
hypothetical protein id=12494696 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11416..11790
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A4324
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11774..12277
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381DC7C
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12274..13032
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E9D15 rbh
transmembrane transcriptional regulator (anti-sigma factor)
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13103..13966)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003733210 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13956..16127)
DNA (2172bp) protein (724aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein id=1355379 bin=GWE1_T_denit_62_9 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_21
unknown

Not on your lists

comp(16124..16234)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_171_22
unknown

Not on your lists

16432..16662
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_171_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16791..17924
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003782FDF rbh
mcp; methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAL97382.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_expt_500_p_scaffold_171_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17955..18887
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364FB08 rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18890..19942
DNA (1053bp) protein (351aa)
homoserine O-succinyltransferase (EC:2.3.1.46); K00651 homoserine O-succinyltransferase [EC:2.3.1.46] rbh
homoserine O-succinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CFBA2 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19939..21033
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379DE55 rbh
ABC transporter permease; K02066 putative ABC transport system permease protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21033..21800
DNA (768bp) protein (256aa)
iron ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003822162 rbh
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_171_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21790..22737
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DA0D9 rbh
ABC-type transport system periplasmic component; K02067 putative ABC transport system substrate-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22734..23336
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003609858 rbh
putative lipoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_171_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23384..23812
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AE73C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 200 in total

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