name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_601_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..1167
|
6-phosphofructokinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003740863
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_500_p_scaffold_601_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1217..1462
|
hypothetical protein id=12493577 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1525..3141
|
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003638A2B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3138..3344
|
hppA; pyrophosphate-energized proton pump (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=1327863 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3440..3646
|
hypothetical protein id=12493575 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3712..4242
|
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036626DA
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4668..5681
|
ATPase AAA n=1 Tax=Thiobacillus thioparus RepID=UPI00037041EC
recombination factor protein RarA; K07478 putative ATPase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_601_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5777..6193
|
Putative uncharacterized protein id=1327872 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6206..6886
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E7D76
rbh
hypothetical protein
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6984..7454
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D4ECF
hypothetical protein; K09004 hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7442..10213)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B7176
rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10602..11603
|
putative periplasmic protease; K04774 serine protease SohB [EC:3.4.21.-] id=12493565 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative periplasmic protease; K04774 serine protease SohB [EC:3.4.21.-]
Serine protease SohB {ECO:0000313|EMBL:AAZ98582.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_500_p_scaffold_601_13
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11791..14154
|
Type I site-specific deoxyribonuclease n=1 Tax=Thiocapsa marina 5811 RepID=F9U565_9GAMM
rbh
helicase, type I site-specific restriction-modification system restriction subunit
rbh
Tax=GWA2_Rhodocyclales_65_20_curated
|
|
SCNpilot_expt_500_p_scaffold_601_14
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14157..14999
|
DNA-binding protein n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B7AC77
hypothetical protein
rbh
Tax=GWA2_Rhodocyclales_65_20_curated
|
|
SCNpilot_expt_500_p_scaffold_601_15
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15003..16205
|
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:EGV20289.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EGV20289.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
adenine-specific DNA-methyltransferase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Thiocapsa marina 5811 RepID=F9U566_9GAMM
rbh
|
|
SCNpilot_expt_500_p_scaffold_601_16
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16354..18555
|
Type I restriction-modification system, S subunit n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I6S0_BORPD
type I restriction-modification system subunit S
Type I restriction-modification system, S subunit {ECO:0000313|EMBL:CAP44335.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
|
|
SCNpilot_expt_500_p_scaffold_601_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18712..19665
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C110A
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97439.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_500_p_scaffold_601_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20117..21247)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037551CD
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_19
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21222..21860)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037551CD
Uncharacterized protein {ECO:0000313|EMBL:GAO37019.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_601_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22055..22477)
|
twitching motility protein PilT n=1 Tax=Thiobacillus thioparus RepID=UPI000378EA20
PilT protein domain-containing protein; K07062
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22474..22728)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361D831
prevent-host-death family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22818..23072)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B159A
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_601_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23198..23800
|
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
rbh
umuDC operon protein-like protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378691D
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_601_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24010..24846
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EB2DE
rbh
DNA topoisomerase I:restriction endonuclease; K07448 restriction system protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_25
unknown
|
Not on your lists |
comp(24813..24947)
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_601_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25109..28156
|
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIU2_THIDA
rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_500_p_scaffold_601_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28260..28877
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363CDE2
rbh
nitroreductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28987..29580
|
Uncharacterized protein id=1324492 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_601_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29624..29875
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003690C6F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_601_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29996..30484
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371C6BA
rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|