name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_903_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..901)
|
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ribonuclease E n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0F99
|
|
SCNpilot_expt_500_p_scaffold_903_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1190..2158
|
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ribosomal large subunit pseudouridine synthase C n=1 Tax=Thiobacillus thioparus RepID=UPI000368ADF0
rbh
|
|
SCNpilot_expt_500_p_scaffold_903_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2142..2798
|
putative hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] id=12493111 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2777..3127
|
(2Fe-2S)-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F4CD3
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3138..4088
|
peptidase S49 n=1 Tax=Thiobacillus thioparus RepID=UPI00037D5B5B
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4085..4294
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003705332
transcriptional antiterminator, Rof
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4306..5013)
|
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003774B1D
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4989..5618)
|
septum formation protein Maf n=1 Tax=Thiobacillus thioparus RepID=UPI00036F81F4
rbh
Maf-like protein; K06287 septum formation protein
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5615..7462)
|
pyruvate carboxylase n=1 Tax=Thiobacillus thioparus RepID=UPI000374C5DF
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7464..8882)
|
pyruvate carboxylase subunit A (EC:6.3.4.14); K01959 pyruvate carboxylase subunit A [EC:6.4.1.1]
rbh
acetyl-CoA carboxylase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003618A3C
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9320..9499
|
50S ribosomal protein L32 id=1360988 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9568..10587
|
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
rbh
phosphate acyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003604250
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10584..11543
|
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
rbh
3-oxoacyl-ACP synthase n=1 Tax=Thiobacillus thioparus RepID=UPI000372375F
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_500_p_scaffold_903_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11556..12479
|
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
rbh
Malonyl CoA-acyl carrier protein transacylase id=1359362 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12491..13261
|
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
rbh
3-ketoacyl-ACP reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F4B51
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13334..13567
|
Acyl carrier protein id=1359360 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Acyl carrier protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_500_p_scaffold_903_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13735..14967
|
3-oxoacyl-(acyl carrier protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
rbh
3-oxoacyl-ACP synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00037BD0B0
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_18
unknown
|
Not on your lists |
15091..15234
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036069FE
|
|
SCNpilot_expt_500_p_scaffold_903_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15231..16040
|
aminodeoxychorismate lyase apoprotein (EC:4.1.3.38); K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DDD4B
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_500_p_scaffold_903_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16024..17022
|
aminodeoxychorismate lyase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F7E7C
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_500_p_scaffold_903_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17019..17630
|
thymidylate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00035D462D
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17627..18610
|
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
rbh
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038084FA
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18623..18994
|
pilus assembly protein PilZ n=1 Tax=Thiobacillus thioparus RepID=UPI00035E8156
type IV pilus assembly protein PilZ; K02676 type IV pilus assembly protein PilZ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19021..19791
|
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00038283A3
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19905..20408)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A89E0
rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20521..21636)
|
molecular chaperone DnaJ n=1 Tax=Thiobacillus thioparus RepID=UPI0003715E7E
rbh
molecular chaperone protein DnaJ; K03686 molecular chaperone DnaJ
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21725..23080)
|
molecular chaperone DnaK n=1 Tax=Thiobacillus thioparus RepID=UPI000366C4EA
molecular chaperone protein DnaK; K04043 molecular chaperone DnaK
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_p_scaffold_903_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23080..23211)
|
molecular chaperone protein DnaK; K04043 molecular chaperone DnaK id=12493086 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
molecular chaperone protein DnaK; K04043 molecular chaperone DnaK
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23282..23803)
|
molecular chaperone GrpE n=1 Tax=Thiobacillus thioparus RepID=UPI00036A8592
rbh
molecular chaperone protein GrpE; K03687 molecular chaperone GrpE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_p_scaffold_903_30
unknown
|
Not on your lists |
24182..24379
|
This feature has no annotations |