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SCNpilot_expt_500_p_scaffold_910

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_910_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..170
DNA (168bp) protein (56aa)
conjugative coupling factor TraD, TOL family id=12497086 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160..885
DNA (726bp) protein (242aa)
hypothetical protein id=12497087 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1114..1623
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E373C rbh
emrR; EmrR; K15974 MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_4

Not on your lists

1620..3044
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003731233 rbh
Putative fusaric acid resistance protein fusA {ECO:0000313|EMBL:BAD81003.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
efflux transporter, outer membrane factor lipoprotein, NodT family
SCNpilot_expt_500_p_scaffold_910_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3041..4183
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377AF17 rbh
efflux pump membrane protein; K03543 multidrug resistance protein A
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_6
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4188..5717
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003649E42 rbh
Multidrug resistance protein B {ECO:0000313|EMBL:ERE07060.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
emrB; multidrug resistance protein B
SCNpilot_expt_500_p_scaffold_910_7
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5783..6142
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368F038
Lipoprotein, putative {ECO:0000313|EMBL:EEG08530.1}; Flags: Precursor;; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_910_8
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6249..6806)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FC848 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERL53201.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_500_p_scaffold_910_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6830..7903
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037BB687 rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8339..8542
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003802E30
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8566..9450)
DNA (885bp) protein (295aa)
polyphosphate:nucleotide phosphotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000367D6D5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAN34544.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_expt_500_p_scaffold_910_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9648..9875
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003763841
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_910_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10332..12251
DNA (1920bp) protein (640aa)
PrkA family serine protein kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000365C770 rbh
putative Serine protein kinase, PrkA; K07180 serine protein kinase rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12262..13518
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381EC44 rbh
hypothetical protein; K09786 hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_910_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13520..15058
DNA (1539bp) protein (513aa)
SpoVR family protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DCBEA rbh
SpoVR family protein rbh
SpoVR like family protein {ECO:0000313|EMBL:AAZ97187.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_p_scaffold_910_16
unknown

Not on your lists

comp(15486..15707)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_910_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15774..16679
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375ED32
integrase family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_500_p_scaffold_910_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16839..19955)
DNA (3117bp) protein (1039aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170 rbh
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_910_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19952..20995)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_910_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20992..22401)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_910_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22908..23294
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GYQ4_9GAMM
crcB protein
Tax=CG_Hydro_01
SCNpilot_expt_500_p_scaffold_910_22
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23291..23659
DNA (369bp) protein (123aa)
Histidine triad (HIT) protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLX9_SIDLE
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADE12574.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
SCNpilot_expt_500_p_scaffold_910_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23671..24015
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H0C9_9GAMM
hypothetical protein
Tax=CG_Hydro_01
SCNpilot_expt_500_p_scaffold_910_24
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24025..25197
DNA (1173bp) protein (391aa)
Glutathione-regulated potassium-proton antiporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMZ9_PSEUO
sodium/hydrogen exchanger rbh
Tax=GWA2_Gallionellales_60_142_curated
SCNpilot_expt_500_p_scaffold_910_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25194..25613
DNA (420bp) protein (140aa)
Universal stress protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HNF0_PSEUO
UspA domain-containing protein
Tax=CG_Hydro_01
SCNpilot_expt_500_p_scaffold_910_26
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25710..26969
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU27_9GAMM rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEM47879.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_expt_500_p_scaffold_910_27
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27049..28503)
DNA (1455bp) protein (485aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
heavy metal sensor signal transduction histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] rbh
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9 rbh
SCNpilot_expt_500_p_scaffold_910_28
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28508..29182)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037FA685 rbh
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
two component heavy metal response winged helix family transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR rbh
SCNpilot_expt_500_p_scaffold_910_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29348..30217)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP60_9ZZZZ
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_p_scaffold_910_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30214..31152)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP59_9ZZZZ rbh
transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 41 in total

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