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SCNpilot_expt_500_p_scaffold_1740

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1740_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(323..1048)
DNA (726bp) protein (242aa)
Membrane protein TerC, possibly involved in tellurium resistance n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL98_9PROT rbh
Membrane protein TerC, possibly involved in tellurium resistance {ECO:0000313|EMBL:CCU63739.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
integral membrane protein TerC rbh
SCNpilot_expt_500_p_scaffold_1740_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1233..2441)
DNA (1209bp) protein (403aa)
Patatin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM22_9PROT rbh
Patatin {ECO:0000313|EMBL:CCU63738.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
patatin; K07001 NTE family protein rbh
SCNpilot_expt_500_p_scaffold_1740_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2875..4284)
DNA (1410bp) protein (470aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
fumC; fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] rbh
Fumarate hydratase class II n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY7_9PROT rbh
SCNpilot_expt_500_p_scaffold_1740_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4543..4818)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y662_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75759.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_p_scaffold_1740_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5113..5742)
DNA (630bp) protein (210aa)
Histone protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM18_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49334.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1740_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5934..7103)
DNA (1170bp) protein (390aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355, ECO:0000313|EMBL:KIO49333.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLC5_9PROT rbh
SCNpilot_expt_500_p_scaffold_1740_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7145..9994)
DNA (2850bp) protein (950aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJX8_9PROT rbh
SCNpilot_expt_500_p_scaffold_1740_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10265..11395)
DNA (1131bp) protein (377aa)
Rhomboid family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL90_9PROT rbh
Rhomboid family protein {ECO:0000313|EMBL:CCU63729.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
rhomboid-like protein rbh
SCNpilot_expt_500_p_scaffold_1740_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11621..12853
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLB1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO49466.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_1740_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13008..14780
DNA (1773bp) protein (591aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] rbh
Arginine--tRNA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW6_9PROT rbh
Displaying 10 items

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