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SCNpilot_expt_500_p_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_281_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..1091)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRB0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48998.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_281_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1220..1717)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y666_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO49083.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_281_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2159..2566)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J1_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO49083.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_281_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2805..3131)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J1_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO48118.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_281_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3453..4265)
DNA (813bp) protein (271aa)
O-methyltransferase, family 3 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAH9_NITMU rbh
Methyltransferase {ECO:0000313|EMBL:KIO49088.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
O-methyltransferase family protein rbh
SCNpilot_expt_500_p_scaffold_281_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4445..4789)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCY8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73383.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_p_scaffold_281_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5367..5780
DNA (414bp) protein (138aa)
Regulator of nucleoside diphosphate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH09_9PROT
Regulator of nucleoside diphosphate kinase {ECO:0000313|EMBL:CCU61779.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_expt_500_p_scaffold_281_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5933..7654
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAI1_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB74240.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_p_scaffold_281_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..8370)
DNA (528bp) protein (176aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] rbh
Adenine phosphoribosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=APT_NITMU rbh
SCNpilot_expt_500_p_scaffold_281_10
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8486..9055)
DNA (570bp) protein (190aa)
Site-specific recombinase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PCC0_CELJU
ccrB; Site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:ACE83360.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
SCNpilot_expt_500_p_scaffold_281_11
unknown

Not on your lists

9166..9393
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_281_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9637..9822
DNA (186bp) protein (62aa)
UPI0003D5EAA4 related cluster n=1 Tax=unknown RepID=UPI0003D5EAA4
Uncharacterized protein {ECO:0000313|EMBL:ETI63511.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_281_13
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10251..10526
DNA (276bp) protein (92aa)
Plasmid maintenance system killer n=1 Tax=Microcystis aeruginosa PCC 9717 RepID=I4FTW4_MICAE
Plasmid maintenance system killer {ECO:0000313|EMBL:CCH99089.1}; TaxID=1160286 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9717.;"
plasmid maintenance system killer protein; K07334 proteic killer suppression protein
SCNpilot_expt_500_p_scaffold_281_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10553..10855
DNA (303bp) protein (101aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC11_DESAR
XRE family transcriptional regulator {ECO:0000313|EMBL:ETX04944.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
XRE family transcriptional regulator
SCNpilot_expt_500_p_scaffold_281_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11254..11574
DNA (321bp) protein (107aa)
Putative antirestriction protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XK5_NITEU
Antirestriction protein {ECO:0000313|EMBL:KIO48296.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
antirestriction protein
SCNpilot_expt_500_p_scaffold_281_16
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11580..11858)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037FC966
transposase IS3/IS911 family protein
Tax=CG_Beta_01
SCNpilot_expt_500_p_scaffold_281_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12378..13547
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036ED741
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
SCNpilot_expt_500_p_scaffold_281_18
unknown

Not on your lists

comp(13906..14244)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_281_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14364..14855
DNA (492bp) protein (164aa)
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y822_NITMU
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ABB75099.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_p_scaffold_281_20
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15041..15781)
DNA (741bp) protein (247aa)
4'-phosphopantetheinyl transferase; K06133 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
4'-phosphopantetheinyl transferase n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J5H4_PSEUL
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:BAK77319.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCNpilot_expt_500_p_scaffold_281_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16069..20841
DNA (4773bp) protein (1591aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00031885C3 rbh
non-ribosomal peptide synthase/amino acid adenylation enzyme rbh
Non-ribosomal peptide synthase/amino acid adenylation enzyme {ECO:0000313|EMBL:AFZ17608.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCNpilot_expt_500_p_scaffold_281_22
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20864..26734
DNA (5871bp) protein (1957aa)
amino acid adenylation protein (EC:2.3.1.161 5.1.1.13) rbh
Chondramide synthase cmdD n=1 Tax=Chondromyces crocatus RepID=CHSAD_CHOCO rbh
Uncharacterized protein {ECO:0000313|EMBL:AHH95959.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCNpilot_expt_500_p_scaffold_281_23
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

26731..28470
DNA (1740bp) protein (580aa)
condensation domain-containing protein (EC:5.1.1.13)
Condensation domain protein {ECO:0000313|EMBL:ACC81846.1}; EC=5.1.1.13 {ECO:0000313|EMBL:ACC81846.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
Condensation domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J0Z5_NOSP7
SCNpilot_expt_500_p_scaffold_281_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28520..32062
DNA (3543bp) protein (1181aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000373F511 rbh
amino acid adenylation protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_500_p_scaffold_281_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32034..32660
DNA (627bp) protein (209aa)
Putative leucyldemethylblasticidin S guanidino methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJN5_9PROT
Putative leucyldemethylblasticidin S guanidino methyltransferase {ECO:0000313|EMBL:CCU62994.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative multi-domain non-ribosomal peptide synthetase
SCNpilot_expt_500_p_scaffold_281_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32845..33474
DNA (630bp) protein (210aa)
CheW protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKD9_9PROT
Chemotaxis protein CheW {ECO:0000313|EMBL:KIO48625.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CheW protein; K03408 purine-binding chemotaxis protein CheW
SCNpilot_expt_500_p_scaffold_281_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33497..35017
DNA (1521bp) protein (507aa)
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:CCU63037.1}; EC=2.1.1.80 {ECO:0000313|EMBL:CCU63037.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
MCP methyltransferase, CheR-type (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] rbh
Chemotaxis protein methyltransferase CheR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU2_9PROT rbh
SCNpilot_expt_500_p_scaffold_281_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35010..35642
DNA (633bp) protein (211aa)
CheW protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI36_9PROT
CheW protein {ECO:0000313|EMBL:CCU63036.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
CheW protein; K03408 purine-binding chemotaxis protein CheW
SCNpilot_expt_500_p_scaffold_281_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35754..37217
DNA (1464bp) protein (488aa)
Type IV pilus biogenesis protein PilJ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUH3_9PROT rbh
Type IV pilus biogenesis protein PilJ {ECO:0000313|EMBL:CCU63035.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
methyl-accepting chemotaxis sensory transducer rbh
SCNpilot_expt_500_p_scaffold_281_30
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37233..39593
DNA (2361bp) protein (787aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] rbh
Signal transduction histidine kinase CheA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJR3_9PROT rbh
Signal transduction histidine kinase CheA {ECO:0000313|EMBL:CCU63034.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Displaying items 1-30 of 56 in total

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