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SCNpilot_expt_500_p_scaffold_544

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_544_1
unknown

Not on your lists

2..316
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365..955)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJW3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70671.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TIR domain-containing protein
SCNpilot_expt_500_p_scaffold_544_3
unknown

Not on your lists

comp(1033..1215)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1415..2626)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB66_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40475.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
SCNpilot_expt_500_p_scaffold_544_5
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3080..3664)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9BUK6_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03588.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_544_6
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3661..4161)
DNA (501bp) protein (167aa)
Peptidase A2A n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZDD2_9PROT
peptidase A2A
Peptidase A2A {ECO:0000313|EMBL:ADZ27841.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_expt_500_p_scaffold_544_7
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4127..5185)
DNA (1059bp) protein (353aa)
Phage-like protein tail component-like protein n=1 Tax=Ralstonia sp. PBA RepID=I9KTK4_9RALS
Phage-like protein tail component-like protein {ECO:0000313|EMBL:EIZ03590.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
phage tail protein
SCNpilot_expt_500_p_scaffold_544_8
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5173..5538)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W577_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03589.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
SCNpilot_expt_500_p_scaffold_544_9
unknown

Not on your lists

comp(5697..6329)
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_10
unknown

Not on your lists

comp(6379..6564)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_11
unknown

Not on your lists

comp(6894..7124)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_12
unknown

Not on your lists

comp(7138..7311)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7474..7845)
DNA (372bp) protein (124aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_500_p_scaffold_544_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8178..8633)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62638.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_expt_500_p_scaffold_544_15
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8630..9211)
DNA (582bp) protein (194aa)
Tax=RBG_16_Gammaproteobacteria_51_14_curated
SCNpilot_expt_500_p_scaffold_544_16
unknown

Not on your lists

comp(9706..10287)
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_17
unknown

Not on your lists

comp(10401..10640)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_18
unknown

Not on your lists

comp(10627..10890)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10887..11249)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 PF0_9PROT">RepID=M5DPF0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO47842.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_500_p_scaffold_544_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11339..12538)
DNA (1200bp) protein (400aa)
Integrase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTD8_9PROT rbh
Integrase {ECO:0000313|EMBL:CCU62645.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
integrase family protein rbh
SCNpilot_expt_500_p_scaffold_544_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13065..13679)
DNA (615bp) protein (205aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CCU62662.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CCU62662.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ29_9PROT rbh
SCNpilot_expt_500_p_scaffold_544_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13907..15727)
DNA (1821bp) protein (607aa)
UvrABC system protein C n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UVRC_NITMU rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C rbh
SCNpilot_expt_500_p_scaffold_544_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15733..15921)
DNA (189bp) protein (63aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-]
4-oxalocrotonate tautomerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9J8_NITMU
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:ABB74573.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_p_scaffold_544_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16011..16706)
DNA (696bp) protein (232aa)
Uracil-DNA glycosylase, family 5 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTG3_9PROT rbh
SPO1 DNA polymerase {ECO:0000313|EMBL:KIO49138.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_544_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16771..17337
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=EFP_NITMU rbh
translation elongation factor P; K02356 elongation factor P rbh
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_p_scaffold_544_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17383..18705)
DNA (1323bp) protein (441aa)
Phosphate-selective porin O and P n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9K1_NITMU rbh
Porin {ECO:0000313|EMBL:KIO49223.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phosphate-selective porin O and P; K07221 phosphate-selective porin OprO and OprP rbh
SCNpilot_expt_500_p_scaffold_544_27
unknown

Not on your lists

19532..19906
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_544_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20049..20774
DNA (726bp) protein (242aa)
Kazal-type serine protease inhibitor domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLD1_9PROT
Kazal-type serine protease inhibitor domain {ECO:0000313|EMBL:CCU63473.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proteinase inhibitor I1, Kazal
SCNpilot_expt_500_p_scaffold_544_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20792..21235)
DNA (444bp) protein (148aa)
Response regulator receiver protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T5V3_METSL
Chemotaxis protein CheY {ECO:0000313|EMBL:KIO49142.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
response regulator receiver protein
SCNpilot_expt_500_p_scaffold_544_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21276..22679)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Putative two-component histidine kinase sensor protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M4_HERAR rbh
two-component histidine kinase sensor protein rbh
Displaying items 1-30 of 47 in total

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