name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_687_1
unknown
|
Not on your lists |
1..213
|
This feature has no annotations |
|
SCNpilot_expt_500_p_scaffold_687_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1090..1881
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKU4_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU63539.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2134..2523
|
COGs COG0226 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW38_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49069.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_687_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2504..3766
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJE2_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU63541.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3778..6708
|
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKW8_9PROT
rbh
Diguanylate cyclase {ECO:0000313|EMBL:KIO49010.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
diguanylate cyclase/phosphodiesterase
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6793..8154)
|
Putative sensory histidine kinase YfhA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK59_9PROT
rbh
Putative sensory histidine kinase YfhA {ECO:0000313|EMBL:CCU63172.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
two component sigma-54 specific Fis family transcriptional regulator
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8165..8701)
|
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9V8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74463.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_500_p_scaffold_687_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8692..10203)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
periplasmic sensor signal transduction histidine kinase; K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
rbh
Putative sensor-like histidine kinase YfhK n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUZ1_9PROT
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11008..11361)
|
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
arsenate reductase-like protein; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR0_9PROT
|
|
SCNpilot_expt_500_p_scaffold_687_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11420..13129)
|
TrkA-N:Sodium/hydrogen exchanger n=1 Tax=Nitrosospira sp. APG3 RepID=M5DII6_9PROT
rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KIO48924.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
TrkA-N:Sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13349..14266)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK20_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48990.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
peptidase M10A and M12B matrixin and adamalysin
|
|
SCNpilot_expt_500_p_scaffold_687_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14295..15404)
|
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Alanine dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKQ6_9PROT
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15614..16366)
|
Dienelactone hydrolase family protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W4_NITMU
rbh
dienelactone hydrolase family protein
rbh
Dienelactone hydrolase family protein {ECO:0000313|EMBL:ABB74457.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_500_p_scaffold_687_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16479..17858)
|
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DII3_9PROT
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17862..18167)
|
transmembrane NAD(P) transhydrogenase (subunit alpha part 2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
Probable transmembrane NAD(P) transhydrogenase (Alpha subunit part 2) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W6_NITMU
Pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:KIO48926.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_expt_500_p_scaffold_687_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18211..19338)
|
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
rbh
NAD(P) transhydrogenase subunit alpha n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W7_NITMU
rbh
NADP transhydrogenase subunit alpha {ECO:0000313|EMBL:KIO48927.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_expt_500_p_scaffold_687_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19716..23195)
|
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W8_NITMU
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB74453.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_500_p_scaffold_687_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23668..24951)
|
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase large subunit {ECO:0000256|HAMAP-Rule:MF_00062}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00062}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Sulfate adenylyltransferase, large subunit (EC:2.7.7.4); K00956 sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
rbh
Sulfate adenylyltransferase subunit 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK45_9PROT
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25040..26062)
|
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732, ECO:0000313|EMBL:KIO48991.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
rbh
Sulfate adenylyltransferase subunit 2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUX1_9PROT
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26071..26904)
|
Phosphoadenylyl-sulfate reductase [thioredoxin] / Adenylyl-sulfate reductase [thioredoxin] {ECO:0000313|EMBL:CCU63154.1}; EC=1.8.4.10 {ECO:0000313|EMBL:CCU63154.1};; EC=1.8.4.8 {ECO:0000313|EMBL:CCU63154.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8]
rbh
Phosphoadenylyl-sulfate reductase [thioredoxin] / Adenylyl-sulfate reductase [thioredoxin] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK09_9PROT
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26953..29046)
|
Ferredoxin--sulfite reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKP7_9PROT
rbh
Nitrite reductase {ECO:0000313|EMBL:KIO48931.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
nitrite and sulfite reductase 4Fe-4S region
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29232..30158
|
Cys regulon transcriptional activator CysB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK41_9PROT
rbh
CysB family transcriptional regulator {ECO:0000313|EMBL:KIO48932.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
transcriptional regulator CysB-like protein; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator
rbh
|
|
SCNpilot_expt_500_p_scaffold_687_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30384..32264
|
DNA mismatch repair protein MutL n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9X4_NITMU
rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL
rbh
|