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SCNpilot_expt_500_p_scaffold_220_76

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: 84403..85650

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 413.0
  • Bit_score: 760
  • Evalue 1.60e-216
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 413.0
  • Bit_score: 743
  • Evalue 2.70e-212
  • rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKX9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 413.0
  • Bit_score: 760
  • Evalue 1.10e-216
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGACTATGTCTCAGAATGGCTTTCCGCCGCGCCGCAATAGTGTGGGGGTACGCATCGGAAATATCACCGTCGGGGGGGGAGCGCCCATTGTCGTGCAATCGATGACCAATACCGATACCGAAAATGAGGTTGCCACGGCATTGCAAGTCGCCCAGCTCGCGCGCGCCGGATCGGAACTGGTCCGCATCACGGTCAATACCGCCGCGGCTGCCAAAGCGGTGCCCGGTATCCGCGCCCGCCTCGATGCCATGGATTGTCATGTTCCGCTCATTGGCGACTTCCATTTCAATGGCCACAAGCTCGTGACCGAATTTCCGGATTGTGCGAGGGCATTGGCCAAGTACCGTATCAACCCTGGCAATGTAGGGCACGGAAAGAAACGCGATGAGCAATTTTCCATTCTGATTGAAGCCGCATGCAAGTACGAGAAGCCGGTGCGCATCGGCGTGAACTGGGGCAGCCTGGACCCGGAATTGCTTGCGCGCATGATGGATGAGAATGCCTCCTCCGCCGATCCCCAGGATGCGGGGGTGGTGATGCGAAAGGCGCTCATCACTTCGGCGCTGGAGAGCGCCAGGCGTGCGGAAGAGATAGGCCTTGGACGGGATCGCATCATATTGTCCTGCAAGGTAAGCGGTGTCCGGGACTTGATCAGTGTTTACCGGGAACTGGCGGCGGATTGCAACTATGCCCTGCATCTTGGATTGACCGAGGCAGGAATGGGTTCCAAAGGCATCGTGGCTTCCACTGCCGCGCTATCGGTACTGCTGCTGGAGGGCATAGGCGATACCATCCGGATATCGCTTACGCCGGAGCCCGGCGGGGATCGTTCCCGCGAGGTGGTCGTTGCCCAGGAAATCCTGCAGACCACGGGCTTGCGGGCTTTCGTACCTCTGGTGGCGGCCTGCCCCGGATGCGGGCGTACAACCAGCACTTATTTTCAGGAGCTGGCGGAAAGCATACAAGGATATGTTCGTGAACAGATGCTGGTATGGCGTGAAGAATATGATGGCGTAGAGAACATGACCCTGGCGGTGATGGGCTGCGTTGTCAATGGCCCCGGTGAAAGCAAGCACGCCAATATCGGCATCAGCCTTCCCGGTTCGGGGGAACGGCCTGTGGCGCCCGTTTACGTGGATGGTCGCAAATCCGTTACCTTGAAGGGCGACAATATCGCAGGTGAATTTCGCCAGATCGTCGATGACTATGTGCAGATGAAATATCCGAAGAAAACGGCCGCCGGCTAG
PROTEIN sequence
Length: 416
MTMSQNGFPPRRNSVGVRIGNITVGGGAPIVVQSMTNTDTENEVATALQVAQLARAGSELVRITVNTAAAAKAVPGIRARLDAMDCHVPLIGDFHFNGHKLVTEFPDCARALAKYRINPGNVGHGKKRDEQFSILIEAACKYEKPVRIGVNWGSLDPELLARMMDENASSADPQDAGVVMRKALITSALESARRAEEIGLGRDRIILSCKVSGVRDLISVYRELAADCNYALHLGLTEAGMGSKGIVASTAALSVLLLEGIGDTIRISLTPEPGGDRSREVVVAQEILQTTGLRAFVPLVAACPGCGRTTSTYFQELAESIQGYVREQMLVWREEYDGVENMTLAVMGCVVNGPGESKHANIGISLPGSGERPVAPVYVDGRKSVTLKGDNIAGEFRQIVDDYVQMKYPKKTAAG*