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SCNpilot_expt_500_p_scaffold_4221

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4221_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..922)
DNA (921bp) protein (307aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=12493431 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_4221_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(919..1959)
DNA (1041bp) protein (347aa)
queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=12493430 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_4221_3
unknown

Not on your lists

comp(2329..2598)
DNA (270bp) protein (90aa)
id=12493429 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_expt_500_p_scaffold_4221_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2595..2894)
DNA (300bp) protein (100aa)
id=12493428 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
Tax=RBG_16_Betaproteobacteria_58_11_curated
SCNpilot_expt_500_p_scaffold_4221_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2866..3117)
DNA (252bp) protein (84aa)
id=12493427 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_500_p_scaffold_4221_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3382..3672)
DNA (291bp) protein (97aa)
hypothetical protein id=12493426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_4221_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3703..4845)
DNA (1143bp) protein (381aa)
major facilitator superfamily protein id=12493425 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
major facilitator superfamily protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_4221_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5044..5529
DNA (486bp) protein (162aa)
YbaK-like protein id=12493424 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
YbaK-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_4221_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5650..6210
DNA (561bp) protein (187aa)
putative aspartyl protease; K06985 aspartyl protease family protein id=12493423 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative aspartyl protease; K06985 aspartyl protease family protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_4221_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6361..6567
DNA (207bp) protein (69aa)
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) id=12493422 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_4221_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6657..7199
DNA (543bp) protein (181aa)
hypothetical protein id=12493421 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_4221_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7207..7731)
DNA (525bp) protein (175aa)
hypothetical protein id=12493420 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_p_scaffold_4221_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7819..8190)
DNA (372bp) protein (124aa)
hypothetical protein id=12493419 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 13 items

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