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SCNpilot_expt_500_p_scaffold_409

Search features with annotation key words

Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_409_1
Rhizobium phage vB_RglS_P106B, Caudovirales, Viruses

Not on your lists

2..865
DNA (864bp) protein (288aa)
ATPase family protein associated with various cellular activities (AAA) n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6APB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHJ10708.1}; TaxID=1458697 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage vB_RglS_P106B.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_409_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

866..1894
DNA (1029bp) protein (343aa)
Putative phage protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA13_9BACT
Putative phage protein {ECO:0000313|EMBL:EEF63354.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_expt_500_p_scaffold_409_3
unknown

Not on your lists

1857..2681
DNA (825bp) protein (275aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_4
uncultured virus, Viruses

Not on your lists

2665..4620
DNA (1956bp) protein (652aa)
RP DNA pol n=1 Tax=Roseobacter phage SIO1 RepID=Q9G0H0_9CAUD
RP DNA pol {ECO:0000313|EMBL:AIW56766.1}; TaxID=340016 species="Viruses; environmental samples.;" source="uncultured virus.;"
SCNpilot_expt_500_p_scaffold_409_5
unknown

Not on your lists

4568..4846
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_6
unknown

Not on your lists

4859..5011
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_7
unknown

Not on your lists

5004..5510
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_8
unknown

Not on your lists

5585..5806
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_9
unknown

Not on your lists

7172..7471
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_10
uncultured virus, Viruses

Not on your lists

7588..8451
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI0003662FE4
Uncharacterized protein {ECO:0000313|EMBL:AIW56771.1}; TaxID=340016 species="Viruses; environmental samples.;" source="uncultured virus.;"
SCNpilot_expt_500_p_scaffold_409_11
unknown

Not on your lists

8441..8614
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_12

Not on your lists

8681..9106
DNA (426bp) protein (142aa)
Recombination endonuclease n=1 Tax=Rhodococcus phage RGL3 RepID=G9FHN7_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKL94939.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_500_p_scaffold_409_13
unknown

Not on your lists

9193..9330
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_14
unknown

Not on your lists

9361..9561
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9570..9830
DNA (261bp) protein (87aa)
Putative uncharacterized protein 12 n=2 Tax=Vibrio phage ICP2 RepID=F1D0U3_9CAUD
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_expt_500_p_scaffold_409_16
unknown

Not on your lists

9851..10006
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_17
unknown

Not on your lists

comp(10122..11327)
DNA (1206bp) protein (402aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_18
unknown

Not on your lists

comp(11331..13517)
DNA (2187bp) protein (729aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_19
unknown

Not on your lists

comp(13517..18649)
DNA (5133bp) protein (1711aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_20
unknown

Not on your lists

comp(18649..19518)
DNA (870bp) protein (290aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_21
unknown

Not on your lists

comp(19518..19943)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_22
unknown

Not on your lists

comp(20064..20390)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_23
unknown

Not on your lists

comp(20387..20755)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_24
unknown

Not on your lists

comp(20748..20990)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_409_25
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20974..21768)
DNA (795bp) protein (265aa)
Thioredoxin reductase (NADPH) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRM1_9BRAD
Thioredoxin reductase (NADPH) {ECO:0000313|EMBL:ERF85449.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_409_26
Roseobacter phage SIO1, Caudovirales, Viruses

Not on your lists

comp(21798..23915)
DNA (2118bp) protein (706aa)
Gp27 n=1 Tax=Roseobacter phage SIO1 RepID=Q9G0F7_9CAUD rbh
Gp27 {ECO:0000313|EMBL:AAG02611.1}; TaxID=136084 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Roseobacter phage SIO1.;"
SCNpilot_expt_500_p_scaffold_409_27
Salinivibrio phage CW02, Caudovirales, Viruses

Not on your lists

comp(23915..24658)
DNA (744bp) protein (248aa)
hypothetical protein ORF040 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155438B
Uncharacterized protein {ECO:0000313|EMBL:AFE86211.1}; TaxID=1161935 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Salinivibrio phage CW02.;"
SCNpilot_expt_500_p_scaffold_409_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24741..26672)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q7R8_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF01834.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_expt_500_p_scaffold_409_29
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26672..27580)
DNA (909bp) protein (303aa)
NitT/TauT family transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ID74_9BRAD
NitT/TauT family transport system permease {ECO:0000313|EMBL:ERF80344.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
phospholipase D/Transphosphatidylase
SCNpilot_expt_500_p_scaffold_409_30
unknown

Not on your lists

comp(27624..28121)
DNA (498bp) protein (166aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

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