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SCNpilot_expt_500_p_scaffold_1465

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1465_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..901
DNA (900bp) protein (300aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Histidine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLN5_9GAMM
SCNpilot_expt_500_p_scaffold_1465_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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945..2864
DNA (1920bp) protein (640aa)
Histidine ammonia-lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKJ1_9GAMM rbh
Histidine ammonia-lyase {ECO:0000313|EMBL:EIL99982.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
histidine ammonia-lyase rbh
SCNpilot_expt_500_p_scaffold_1465_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2888..3286
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99981.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1465_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3359..3724)
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L1_9GAMM
Response regulator receiver protein {ECO:0000313|EMBL:EIL95102.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_expt_500_p_scaffold_1465_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3794..4792)
DNA (999bp) protein (333aa)
Putative quinone oxidoreductase, YhdH/YhfP family n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM4_9GAMM rbh
putative quinone oxidoreductase, YhdH/YhfP family rbh
Putative quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:AGG88636.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1465_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4810..5406)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99920.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
TIGR00730 family protein rbh
SCNpilot_expt_500_p_scaffold_1465_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5556..6980)
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L4_9GAMM rbh
SCNpilot_expt_500_p_scaffold_1465_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7123..8316)
DNA (1194bp) protein (398aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (EC:2.3.1.61) rbh
Dihydrolipoamide succinyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L5_9GAMM rbh
SCNpilot_expt_500_p_scaffold_1465_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8398..11238)
DNA (2841bp) protein (947aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EIL95107.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EIL95107.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2) rbh
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L6_9GAMM rbh
SCNpilot_expt_500_p_scaffold_1465_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11542..12495)
DNA (954bp) protein (318aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC5_9GAMM rbh
putative acyltransferase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1465_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12492..13688)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99915.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_1465_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13710..14468)
DNA (759bp) protein (253aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP57_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIL88998.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative permease
SCNpilot_expt_500_p_scaffold_1465_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14609..16483
DNA (1875bp) protein (625aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) flavoprotein, alpha-component (EC:1.8.1.2)
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP58_9GAMM rbh
SCNpilot_expt_500_p_scaffold_1465_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16567..16995
DNA (429bp) protein (143aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) hemoprotein, beta-component (EC:1.8.1.2)
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP59_9GAMM
Displaying 14 items

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