ggKbase home page

SCNpilot_expt_500_p_scaffold_1560

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1560_1
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..657
DNA (657bp) protein (219aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84]
STE24 endopeptidase id=2574646 bin=GWF2_Bacteroidetes_33_16 species=Azospirillum amazonense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_expt_500_p_scaffold_1560_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(705..1331)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY87_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1560_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1425..2129)
DNA (705bp) protein (235aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF7_9GAMM">RepID=I4WPF7_9GAMM
Glutathione S-transferase {ECO:0000313|EMBL:EIM01349.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione S-transferase rbh
SCNpilot_expt_500_p_scaffold_1560_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2192..2761)
DNA (570bp) protein (190aa)
aminotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000345FC01 rbh
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EIL94054.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nicotinamide mononucleotide transporter PnuC rbh
SCNpilot_expt_500_p_scaffold_1560_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2758..4935)
DNA (2178bp) protein (726aa)
TonB-dependent siderophore receptor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW8_9GAMM rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EIL92759.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
TonB-dependent siderophore receptor rbh
SCNpilot_expt_500_p_scaffold_1560_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5084..6295)
DNA (1212bp) protein (404aa)
Putative homoserine kinase type II (Protein kinase fold) n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ57_9GAMM rbh
putative homoserine kinase type II (protein kinase fold) rbh
Putative homoserine kinase type II (Protein kinase fold) {ECO:0000313|EMBL:AGG89723.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1560_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6353..7297
DNA (945bp) protein (315aa)
Putative permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WY94_9GAMM rbh
Putative permease {ECO:0000313|EMBL:EIM03091.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative permease rbh
SCNpilot_expt_500_p_scaffold_1560_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7379..7969
DNA (591bp) protein (197aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY95_9GAMM
response regulator containing a CheY-like receiver domain and a GGDEF domain
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1560_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7975..8367
DNA (393bp) protein (131aa)
Ribosome-associated heat shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY96_9GAMM
ribosome-associated heat shock protein implicated in recycling of 50S subunit
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1560_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..9089
DNA (612bp) protein (204aa)
Response regulator receiver n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W452_9GAMM
Response regulator receiver {ECO:0000313|EMBL:EIL94243.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_expt_500_p_scaffold_1560_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9102..11690)
DNA (2589bp) protein (863aa)
DNA mismatch repair protein MutS n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUF4_9GAMM rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA mismatch repair protein MutS rbh
SCNpilot_expt_500_p_scaffold_1560_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11848..13035)
DNA (1188bp) protein (396aa)
wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; K02851 UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33]
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W073_9GAMM
Undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase {ECO:0000313|EMBL:EIL92864.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_500_p_scaffold_1560_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13212..14420)
DNA (1209bp) protein (403aa)
Putative polysaccharide export protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W865_9GAMM
Putative polysaccharide export protein {ECO:0000313|EMBL:EIL95656.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
SCNpilot_expt_500_p_scaffold_1560_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15095..16147
DNA (1053bp) protein (351aa)
Capsular exopolysaccharide family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W868_9GAMM
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EIL95659.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
capsular exopolysaccharide family protein
Displaying 14 items

View Taxonomy