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SCNpilot_expt_500_p_scaffold_1568

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1568_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..496
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92251.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1568_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

601..861
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92914.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1568_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

858..2576
DNA (1719bp) protein (573aa)
gamma-glutamyltransferase 1 (EC:2.3.2.2) rbh
Gamma-glutamyltransferase 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NGM7_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1568_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2641..3681
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92916.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF1625) rbh
SCNpilot_expt_500_p_scaffold_1568_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3837..4433)
DNA (597bp) protein (199aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYE6_9GAMM rbh
NTP pyrophosphohydrolase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1568_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4502..5422)
DNA (921bp) protein (307aa)
5'-3' exonuclease (Including N-terminal domain of PolI) n=1 Tax=Rhodanobacter denitrificans RepID=M4NJY5_9GAMM rbh
5'-3' exonuclease (including N-terminal domain of PolI) rbh
5'-3' exonuclease (Including N-terminal domain of PolI) {ECO:0000313|EMBL:AGG88086.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1568_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5419..5988)
DNA (570bp) protein (190aa)
Nitroreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WH68_9GAMM
Nitroreductase {ECO:0000313|EMBL:EIL91033.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nitroreductase
SCNpilot_expt_500_p_scaffold_1568_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6150..6566)
DNA (417bp) protein (139aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ9_9GAMM
Cytidine deaminase {ECO:0000313|EMBL:EIM00051.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_p_scaffold_1568_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6696..7796
DNA (1101bp) protein (367aa)
NAD/NADP transhydrogenase alpha subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NBV6_9GAMM rbh
NAD/NADP transhydrogenase alpha subunit rbh
NAD/NADP transhydrogenase alpha subunit {ECO:0000313|EMBL:AGG88089.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1568_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7827..8360)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00049.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF3106)
SCNpilot_expt_500_p_scaffold_1568_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8365..8757)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00048.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1568_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8754..9398)
DNA (645bp) protein (215aa)
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUY7_9GAMM rbh
RNA polymerase sigma factor, sigma-70 family rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1568_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9567..9872
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Rhodanobacter RepID=M4NEV9_9GAMM
hypothetical protein
Pyruvate kinase {ECO:0000313|EMBL:EIM00046.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_p_scaffold_1568_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9872..11329
DNA (1458bp) protein (486aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Rhodanobacter denitrificans RepID=I4WH75_9GAMM rbh
NAD/NADP transhydrogenase beta subunit rbh
SCNpilot_expt_500_p_scaffold_1568_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11411..11857)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Rhodanobacter RepID=I4WH76_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1568_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12071..12628
DNA (558bp) protein (186aa)
Putative FeS assembly SUF system protein SufT n=2 Tax=Rhodanobacter RepID=I4WH77_9GAMM rbh
putative FeS assembly SUF system protein SufT rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1568_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13128..15278
DNA (2151bp) protein (717aa)
Peptidase M4 thermolysin n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT98_9GAMM rbh
Peptidase M4 thermolysin {ECO:0000313|EMBL:EIM02690.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Zinc metalloprotease (elastase) rbh
SCNpilot_expt_500_p_scaffold_1568_18
unknown

Not on your lists

comp(15215..15400)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1568_19
unknown

Not on your lists

15837..16100
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 19 items

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