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SCNpilot_expt_500_p_scaffold_1602

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1602_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..886)
DNA (885bp) protein (295aa)
Cell division protein FtsZ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG4_9GAMM
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_500_p_scaffold_1602_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1010..2242)
DNA (1233bp) protein (411aa)
Cell division protein ftsA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG3_9GAMM rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell division protein FtsA rbh
SCNpilot_expt_500_p_scaffold_1602_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2253..2987)
DNA (735bp) protein (245aa)
Cell division protein FtsQ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG2_9GAMM rbh
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell division septal protein rbh
SCNpilot_expt_500_p_scaffold_1602_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2984..4051)
DNA (1068bp) protein (356aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Dyella ginsengisoli RepID=UPI00034DF7BA rbh
SCNpilot_expt_500_p_scaffold_1602_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4048..5487)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG0_9GAMM
SCNpilot_expt_500_p_scaffold_1602_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5484..6617)
DNA (1134bp) protein (378aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thioox
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227) rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT16_9GAMM rbh
SCNpilot_expt_500_p_scaffold_1602_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6614..7849)
DNA (1236bp) protein (412aa)
Lipid II flippase FtsW n=1 Tax=Rhodanobacter denitrificans RepID=M4NKY6_9GAMM rbh
cell division-specific peptidoglycan biosynthesis regulator FtsW rbh
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1602_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7979..9079)
DNA (1101bp) protein (367aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13) rbh
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVF7_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1602_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9069..10451)
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10) rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT13_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1602_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10448..11953)
DNA (1506bp) protein (502aa)
UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.13) rbh
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVF5_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1602_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11950..13764)
DNA (1815bp) protein (605aa)
cell division protein FtsI/penicillin-binding protein 2 (EC:2.4.1.129) rbh
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXK9_9GAMM rbh
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:EIL91950.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_500_p_scaffold_1602_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13764..14033)
DNA (270bp) protein (90aa)
Cell division protein FtsL n=1 Tax=Rhodanobacter denitrificans RepID=I4WVQ0_9GAMM
cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1602_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14030..14989)
DNA (960bp) protein (320aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVF2_9GAMM rbh
S-adenosyl-methyltransferase MraW rbh
SCNpilot_expt_500_p_scaffold_1602_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15016..15462)
DNA (447bp) protein (149aa)
Protein MraZ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVF1_9GAMM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
mraZ protein
Displaying 14 items

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