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SCNpilot_expt_500_p_scaffold_1703

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1703_1
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..813)
DNA (813bp) protein (271aa)
Poly-gamma-glutamate synthesis protein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K7A0B9_9ALTE
Poly-gamma-glutamate synthesis protein {ECO:0000313|EMBL:GAC28965.1}; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola pallidula DSM 14239 = ACAM 615.;"
poly-gamma-glutamate capsule biosynthesis protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)
SCNpilot_expt_500_p_scaffold_1703_2
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1030..3783
DNA (2754bp) protein (918aa)
TonB-dependent receptor n=1 Tax=Alishewanella agri BL06 RepID=I9NZW6_9ALTE rbh
TonB-dependent receptor {ECO:0000313|EMBL:EHR40535.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella jeotgali KCTC 22429.;"
TonB-dependent receptor rbh
SCNpilot_expt_500_p_scaffold_1703_3
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3885..5297
DNA (1413bp) protein (471aa)
C4-dicarboxylate anaerobic carrier family protein n=2 Tax=Burkholderia pseudomallei RepID=A3P281_BURP0 rbh
Transporter {ECO:0000313|EMBL:AIY39235.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
C4-dicarboxylate anaerobic carrier family protein rbh
SCNpilot_expt_500_p_scaffold_1703_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5300..7225
DNA (1926bp) protein (642aa)
Putative hydrolase, CocE/NonD family n=1 Tax=Caulobacter crescentus OR37 RepID=R0D1C3_CAUCE rbh
Putative hydrolase, CocE/NonD family {ECO:0000313|EMBL:ENZ82235.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
7 beta-(4-carboxybutanamido)cephalosporanic acid acylase; K06978 rbh
SCNpilot_expt_500_p_scaffold_1703_5
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7278..8207
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJN2_CAUST
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADG10561.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_expt_500_p_scaffold_1703_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8560..9963
DNA (1404bp) protein (468aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000850}; EC=2.7.8.8 {ECO:0000256|PIRNR:PIRNR000850};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphatidylserine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJY3_9GAMM rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase rbh
SCNpilot_expt_500_p_scaffold_1703_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9975..10577)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W774_9GAMM rbh
acetyltransferase, ribosomal protein N-acetylase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1703_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10582..10788)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W773_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95314.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized conserved small protein containing a coiled-coil domain
SCNpilot_expt_500_p_scaffold_1703_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11052..12254
DNA (1203bp) protein (401aa)
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:EIL95312.1}; EC=2.6.1.57 {ECO:0000313|EMBL:EIL95312.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Aromatic amino acid aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W771_9GAMM rbh
aspartate/tyrosine/aromatic aminotransferase rbh
SCNpilot_expt_500_p_scaffold_1703_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12418..13335
DNA (918bp) protein (306aa)
Recombination-associated protein RdgC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR71_9GAMM rbh
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA recombination-dependent growth factor C rbh
SCNpilot_expt_500_p_scaffold_1703_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13468..14238
DNA (771bp) protein (257aa)
Putative metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJY9_9GAMM rbh
putative metal-dependent hydrolase rbh
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AGG90642.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1703_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14261..14656)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIA7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89832.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1703_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14695..15114)
DNA (420bp) protein (140aa)
Putative Fa2h protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR64_9GAMM
Putative Fa2h protein {ECO:0000313|EMBL:EIL89705.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sterol desaturase
Displaying 13 items

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