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SCNpilot_expt_500_p_scaffold_1836

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1836_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..646
DNA (645bp) protein (215aa)
putative metalloendopeptidase; K07386 putative endopeptidase [EC:3.4.24.-]
Putative metalloendopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K9_9GAMM
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL94750.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_500_p_scaffold_1836_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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857..2860
DNA (2004bp) protein (668aa)
endothelin-converting enzyme (EC:3.4.24.71)
Putative metalloendopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM35_9GAMM
Putative metalloendopeptidase {ECO:0000313|EMBL:EIM00527.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_p_scaffold_1836_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3142..5478
DNA (2337bp) protein (779aa)
Catecholate siderophore receptor Fiu n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K7_9GAMM rbh
Catecholate siderophore receptor Fiu {ECO:0000313|EMBL:EIL94748.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_500_p_scaffold_1836_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5516..6196
DNA (681bp) protein (227aa)
PKHD-type hydroxylase ybiX; K07336 PKHD-type hydroxylase [EC:1.14.11.-] rbh
PKHD-type hydroxylase UU9_16436 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJJ0_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1836_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6267..9107
DNA (2841bp) protein (947aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase-associated protein RapA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM34_9GAMM rbh
DNA/RNA helicase, superfamily II, SNF2 family rbh
SCNpilot_expt_500_p_scaffold_1836_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9177..9827)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJI8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87379.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_1836_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9981..10688)
DNA (708bp) protein (236aa)
Cell wall-associated hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM31_9GAMM
cell wall-associated hydrolase, invasion-associated protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_1836_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10871..11605)
DNA (735bp) protein (245aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ2_9GAMM rbh
pyridoxal phosphate enzyme, YggS family rbh
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:AGG88265.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1836_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11718..13133)
DNA (1416bp) protein (472aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K1_9GAMM rbh
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EIL94742.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase rbh
SCNpilot_expt_500_p_scaffold_1836_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13353..13691
DNA (339bp) protein (113aa)
Competence protein ComEA-like protein with helix-hairpin-helix repeat region n=1 Tax=Rhodanobacter denitrificans RepID=M4NF81_9GAMM
competence protein ComEA-like protein with helix-hairpin-helix repeat region
Competence protein ComEA-like protein with helix-hairpin-helix repeat region {ECO:0000313|EMBL:AGG88263.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1836_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13774..14253
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88262.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1836_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14260..14805
DNA (546bp) protein (182aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ6_9GAMM rbh
acetyltransferase, ribosomal protein N-acetylase rbh
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:AGG88261.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_1836_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14813..16435)
DNA (1623bp) protein (541aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ9_9GAMM rbh
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:EIM00515.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfite reductase, alpha subunit (flavoprotein) rbh
Displaying 13 items

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