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SCNpilot_expt_500_p_scaffold_5366

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5366_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(48..257)
DNA (210bp) protein (70aa)
Cold acclimation protein B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC31_9GAMM
Cold acclimation protein B {ECO:0000313|EMBL:EIL97022.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cold shock protein
SCNpilot_expt_500_p_scaffold_5366_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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475..1242
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III (EC:3.1.11.2) rbh
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUE6_9GAMM rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL90837.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_500_p_scaffold_5366_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1248..1925
DNA (678bp) protein (226aa)
YecA family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJC8_9GAMM rbh
yecA family protein rbh
YecA family protein {ECO:0000313|EMBL:AGG90984.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5366_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2013..2759
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMZ1_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90983.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5366_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2863..3696
DNA (834bp) protein (278aa)
Pirin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC35_9GAMM rbh
Pirin {ECO:0000313|EMBL:EIL97026.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pirin-related protein rbh
SCNpilot_expt_500_p_scaffold_5366_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3781..4602)
DNA (822bp) protein (274aa)
Sugar ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUF5_9GAMM rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EIL90846.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family rbh
SCNpilot_expt_500_p_scaffold_5366_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4599..5477)
DNA (879bp) protein (293aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB6_9GAMM
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGG90980.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5366_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5474..6754)
DNA (1281bp) protein (427aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUF7_9GAMM
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIL90848.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
SCNpilot_expt_500_p_scaffold_5366_9
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6751..6921)
DNA (171bp) protein (57aa)
Tat pathway signal protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003493E52
Uncharacterized protein {ECO:0000313|EMBL:GAN68588.1}; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
hypothetical protein
Displaying 9 items

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