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SCNpilot_expt_500_p_scaffold_5429

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5429_1
unknown

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comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_5429_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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282..1058
DNA (777bp) protein (259aa)
TatD family hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP99_9GAMM rbh
TatD family hydrolase {ECO:0000313|EMBL:EIM01291.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hydrolase, TatD family rbh
SCNpilot_expt_500_p_scaffold_5429_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1155..1652
DNA (498bp) protein (166aa)
MarR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH9_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG89480.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5429_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1664..3136
DNA (1473bp) protein (491aa)
NodT family RND efflux system outer membrane lipoprotein n=2 Tax=Rhodanobacter denitrificans RepID=I4WWI0_9GAMM rbh
efflux transporter, outer membrane factor lipoprotein, NodT family rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:AGG89481.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5429_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3133..4335
DNA (1203bp) protein (401aa)
Efflux pump membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W045_9GAMM rbh
Efflux pump membrane protein {ECO:0000313|EMBL:EIL92836.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multidrug resistance efflux pump rbh
SCNpilot_expt_500_p_scaffold_5429_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4345..5898
DNA (1554bp) protein (518aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP6_9GAMM rbh
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIL88487.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
drug resistance transporter, EmrB/QacA subfamily
SCNpilot_expt_500_p_scaffold_5429_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5988..6488
DNA (501bp) protein (167aa)
Polyhydroxyalkonate synthesis repressor PhaR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W047_9GAMM rbh
Polyhydroxyalkonate synthesis repressor PhaR {ECO:0000313|EMBL:EIL92838.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
polyhydroxyalkanoate synthesis repressor PhaR rbh
SCNpilot_expt_500_p_scaffold_5429_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6601..6870
DNA (270bp) protein (90aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP93_9GAMM
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EIM01285.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 8 items

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