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SCNpilot_expt_500_p_scaffold_5629

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5629_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..554
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) RepID=Q12LF5_SHEDO
hypothetical protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AGG87415.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5629_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1040..2119
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B42EE
RHS repeat-associated core domain protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AGG88545.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5629_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2946..4289
DNA (1344bp) protein (448aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF6_9GAMM rbh
Diguanylate cyclase {ECO:0000313|EMBL:EIL91547.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase
SCNpilot_expt_500_p_scaffold_5629_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4533..8132)
DNA (3600bp) protein (1200aa)
Autotransporter serine protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WPP0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI78053.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
autotransporter-associated beta strand repeat protein
SCNpilot_expt_500_p_scaffold_5629_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8129..9619)
DNA (1491bp) protein (497aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U1P9_YERKR
outer membrane autotransporter barrel domain-containing protein 6
Outer membrane autotransporter barrel domain protein 6 {ECO:0000313|EMBL:ADP17124.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_500_p_scaffold_5629_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10089..10565
DNA (477bp) protein (159aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY35_9GAMM
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL92126.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
helix-turn-helix transcriptional regulator
SCNpilot_expt_500_p_scaffold_5629_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10562..10981
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY36_9GAMM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL92127.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bleomycin resistance protein
SCNpilot_expt_500_p_scaffold_5629_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10978..11223
DNA (246bp) protein (82aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY37_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIL92128.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transmembrane protein
SCNpilot_expt_500_p_scaffold_5629_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11100..11834)
DNA (735bp) protein (245aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD70_9GAMM
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL97411.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Displaying 9 items

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