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SCNpilot_expt_500_p_scaffold_5887

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5887_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..842)
DNA (840bp) protein (280aa)
Nucleotide pyrophosphatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTI4_9GAMM
Nucleotide pyrophosphatase {ECO:0000313|EMBL:EIL90525.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative AP superfamily protein
SCNpilot_expt_500_p_scaffold_5887_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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945..1310
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS12_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89449.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5887_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1311..1844)
DNA (534bp) protein (178aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGF5_9GAMM
O-6-methylguanine DNA methyltransferase
SCNpilot_expt_500_p_scaffold_5887_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1841..3337)
DNA (1497bp) protein (499aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.21 2.1.1.63)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:AGG89447.1}; EC=2.1.1.63 {ECO:0000313|EMBL:AGG89447.1};; EC=3.2.2.21 {ECO:0000313|EMBL:AGG89447.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NH75_9GAMM
SCNpilot_expt_500_p_scaffold_5887_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3347..3901)
DNA (555bp) protein (185aa)
Ketosteroid isomerase-like enzyme n=1 Tax=Rhodanobacter denitrificans RepID=I4WS16_9GAMM
ketosteroid isomerase-like enzyme
Ketosteroid isomerase-like enzyme {ECO:0000313|EMBL:AGG89444.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_5887_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4165..4572)
DNA (408bp) protein (136aa)
Response regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBB7_9GAMM
Response regulator {ECO:0000313|EMBL:EIL96758.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
response regulator
SCNpilot_expt_500_p_scaffold_5887_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4644..5951
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Two component system sensor protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBB6_9GAMM rbh
two component system sensor protein rbh
SCNpilot_expt_500_p_scaffold_5887_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6028..7698
DNA (1671bp) protein (557aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
urocanate hydratase (EC:4.2.1.49) rbh
Urocanate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPD1_9GAMM rbh
SCNpilot_expt_500_p_scaffold_5887_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7813..8691
DNA (879bp) protein (293aa)
Nucleotide binding protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4A7_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:AHF86658.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
nucleotide binding protein
SCNpilot_expt_500_p_scaffold_5887_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9155..9847
DNA (693bp) protein (231aa)
Uncharacterized protein {ECO:0000313|EMBL:AHF86656.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
Displaying 10 items

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