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SCNpilot_expt_500_p_scaffold_6135

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6135_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1071
DNA (1071bp) protein (357aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ2_9GAMM
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:AGG87554.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_6135_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1117..1719
DNA (603bp) protein (201aa)
Peptidase S16, lon domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ3_9GAMM rbh
peptidase S16, lon domain protein rbh
Peptidase S16, lon domain protein {ECO:0000313|EMBL:AGG87555.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_6135_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1764..2588
DNA (825bp) protein (275aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ4_9GAMM rbh
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87556.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_6135_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2585..3835
DNA (1251bp) protein (417aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acetylornithine aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDM9_9GAMM rbh
acetylornithine/succinylornithine aminotransferase rbh
SCNpilot_expt_500_p_scaffold_6135_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3832..4251
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDT4_9GAMM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL97625.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
lactoylglutathione lyase-like lyase
SCNpilot_expt_500_p_scaffold_6135_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4253..5536)
DNA (1284bp) protein (428aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDT3_9GAMM rbh
glutamate-1-semialdehyde-2,1-aminomutase rbh
SCNpilot_expt_500_p_scaffold_6135_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5544..6179)
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
Thiamine-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ9_9GAMM
thiamine-phosphate pyrophosphorylase
SCNpilot_expt_500_p_scaffold_6135_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6288..6407
DNA (120bp) protein (40aa)
Rubredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WHR0_9GAMM
rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_6135_9
unknown

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6515..6706
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 9 items

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